RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HTR2BP41595 481 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ADAM15Q13444 863 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ZNF423Q2M1K9 1284 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 FASTKD5Q7L8L6 764 aaKnown RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 PQLC1Q8N2U9 271 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ZNF614Q8N883 585 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 TC2NQ8N9U0 490 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 C3orf58Q8NDZ4 430 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SPPL2AQ8TCT8 520 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ZSWIM1Q9BR11 485 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PI4K2AQ9BTU6 479 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PRKD2Q9BZL6 878 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 MAN1C1Q9NR34 630 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PCDHB16Q9NRJ7 776 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SMPD3Q9NY59 655 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 ATP6V1G2-DDX39BF2Z307 99 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 RASGRP1O95267 797 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 HLA-DRAP01903 254 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ASLP04424 464 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 RARBP10826 455 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SRCP12931 536 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 RPL4P36578 427 aaKnown RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 GPC3P51654 580 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 DCAF4L1Q3SXM0 396 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 FBXO43Q4G163 708 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SLC25A25Q6KCM7 469 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 LURAP1Q96LR2 239 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 KCTD5Q9NXV2 234 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 TICRRQ7Z2Z1 1910 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 LAMB4A4D0S4 1761 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 HMGXB3Q12766 1538 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 DOCK1Q14185 1865 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 EFCAB9A8MZ26 197 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 AIREO43918 545 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CDH1P12830 882 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CYP4B1P13584 511 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SMTNL2Q2TAL5 461 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ACCSLQ4AC99 568 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PAPD4Q6PIY7 484 aaKnown RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 ZNF567Q8N184 647 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 LRRC47Q8N1G4 583 aaKnown RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 LNX2Q8N448 690 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SLC20A1Q8WUM9 679 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 POF1BQ8WVV4 589 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 RTKNQ9BST9 563 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 IRX2Q9BZI1 471 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 TMLHEQ9NVH6 421 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 A0A1B0GVC2 190 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 H7C1Q1 480 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 NCAM2O15394 837 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 RIPK2O43353 540 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 GMFGO60234 142 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 DNAJA2O60884 412 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 NR2F6P10588 404 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 UCHL3P15374 230 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 CD53P19397 219 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 GPC1P35052 558 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 SLC15A1P46059 708 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 SLC39A6Q13433 755 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 PAGE2BQ5JRK9 111 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 FAXCQ5TGI0 409 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 ARMC8Q8IUR7 673 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 HS6ST3Q8IZP7 471 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 ESX1Q8N693 406 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 B3GALNT2Q8NCR0 500 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 GIMAP5Q96F15 307 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 PGM2Q96G03 612 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 TXN2Q99757 166 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 CD93Q9NPY3 652 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.41
VCAN-203ENST00000343200 TNRC6AQ8NDV7 1962 aaKnown RBP6.21□□□□□ -1.41
VCAN-203ENST00000343200 TMEM131Q92545 1883 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 OR6C70A6NIJ9 312 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 RNMTO43148 476 aaKnown RBP6.21□□□□□ -1.41
VCAN-203ENST00000343200 TADA2AO75478 443 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 GSCP56915 257 aaPredicted RBP6.21□□□□□ -1.41
VCAN-203ENST00000343200 ECT2LQ008S8 904 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 NCOA4Q13772 614 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 ANKDD1AQ495B1 522 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 ADCK2Q7Z695 626 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 FBXO36Q8NEA4 188 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 SETD6Q8TBK2 473 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 ZNF669Q96BR6 464 aaPredicted RBP6.21□□□□□ -1.41
VCAN-203ENST00000343200 HSPA12BQ96MM6 686 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 TMEM117Q9H0C3 514 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 AAR2Q9Y312 384 aaKnown RBP6.21□□□□□ -1.41
VCAN-203ENST00000343200 NDUFB9Q9Y6M9 179 aa6.21□□□□□ -1.41
VCAN-203ENST00000343200 AGRPO00253 132 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 AURKAO14965 403 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 TEX33O43247 280 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 TAF5LO75529 589 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 PLATP00750 562 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 GLDCP23378 1020 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 RBL1P28749 1068 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 ABCG1P45844 678 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 NPY2RP49146 381 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 AP2S1P53680 142 aaPredicted RBP6.21□□□□□ -1.42
VCAN-203ENST00000343200 TIMM10P62072 90 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 GRB14Q14449 540 aa6.21□□□□□ -1.42
VCAN-203ENST00000343200 ZNF181Q2M3W8 571 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms