RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 CPXM1Q96SM3 734 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 CPEB1Q9BZB8 566 aaKnown RBP17.16■□□□□ 0.34
TRA2B-202ENST00000342294 EPN3Q9H201 632 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 LRRN3Q9H3W5 708 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 GOLPH3LQ9H4A5 285 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 FOXJ2Q9P0K8 574 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 ZNF212Q9UDV6 495 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 ITM2BQ9Y287 266 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 SNX10Q9Y5X0 201 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 BSNQ9UPA5 3926 aa17.16■□□□□ 0.34
TRA2B-202ENST00000342294 SCN8AQ9UQD0 1980 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 IGLV3-10A0A075B6K4 115 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 A0A1W2PQC6 194 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 C16orf96A6NNT2 1141 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.15■□□□□ 0.34
TRA2B-202ENST00000342294 M0QYT0 321 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 TOR1BO14657 336 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 AREL1O15033 823 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 ZNF202O95125 648 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 CD160O95971 181 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 KRT5P13647 590 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 NOS2P35228 1153 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 EIF4A3P38919 411 aaKnown RBP17.15■□□□□ 0.34
TRA2B-202ENST00000342294 CXCR3P49682 368 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 PPARDQ03181 441 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 SERINC3Q13530 473 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 ZNF658Q5TYW1 1059 aaPredicted RBP17.15■□□□□ 0.34
TRA2B-202ENST00000342294 RETSATQ6NUM9 610 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 TFAP2DQ7Z6R9 452 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 PLPP6Q8IY26 295 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 PCDH19Q8TAB3 1148 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 TMEM159Q96B96 161 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 SLC12A9Q9BXP2 914 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 PIGVQ9NUD9 493 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 MPP6Q9NZW5 540 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 SIRPGQ9P1W8 387 aa17.15■□□□□ 0.34
TRA2B-202ENST00000342294 NBASA2RRP1 2371 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 ILVBLA1L0T0 632 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 C9orf172C9J069 976 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 DNA2P51530 1060 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 ARF5P84085 180 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 CETN1Q12798 172 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 ELOCQ15369 112 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 ZNF805Q5CZA5 627 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 BRMS1LQ5PSV4 323 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 OLFML1Q6UWY5 402 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 ZNF783Q6ZMS7 281 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 VPS36Q86VN1 386 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 PTRH1Q86Y79 214 aaKnown RBP17.14■□□□□ 0.33
TRA2B-202ENST00000342294 OR6C4Q8NGE1 309 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 SCG3Q8WXD2 468 aaKnown RBP17.14■□□□□ 0.33
TRA2B-202ENST00000342294 USP7Q93009 1102 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 C1orf74Q96LT6 269 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 PSMG3-AS1Q96PY0 264 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 NPY6RQ99463 290 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 SPON2Q9BUD6 331 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 B3GNT4Q9C0J1 378 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 TKTL2Q9H0I9 626 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 ZDHHC6Q9H6R6 413 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 MBNL1Q9NR56 388 aaKnown RBP17.14■□□□□ 0.33
TRA2B-202ENST00000342294 MAN2B2Q9Y2E5 1009 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 FCF1Q9Y324 198 aaKnown RBP17.14■□□□□ 0.33
TRA2B-202ENST00000342294 NOTCH2Q04721 2471 aa17.14■□□□□ 0.33
TRA2B-202ENST00000342294 USP9XQ93008 2570 aaPredicted RBP17.14■□□□□ 0.33
TRA2B-202ENST00000342294 NEMP1O14524 444 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 THAP12O43422 761 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 DAB1O75553 588 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 ALPIP09923 528 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 TFE3P19532 575 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-202ENST00000342294 CD82P27701 267 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 OR1E1P30953 314 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 GKP32189 559 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 BLKP51451 505 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 HK3P52790 923 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 PNOCQ13519 176 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 IGFBP7Q16270 282 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 SKIDA1Q1XH10 827 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-202ENST00000342294 FAM183BPQ6ZVS7 135 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 SLC26A9Q7LBE3 791 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 TP53I13Q8NBR0 393 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-202ENST00000342294 ISG20Q96AZ6 181 aaKnown RBP17.13■□□□□ 0.33
TRA2B-202ENST00000342294 CEP63Q96MT8 703 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 EDEM3Q9BZQ6 932 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 APPL1Q9UKG1 709 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 GPR34Q9UPC5 381 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 DOLKQ9UPQ8 538 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 PCDHB11Q9Y5F2 797 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 ACTL7AQ9Y615 435 aa17.13■□□□□ 0.33
TRA2B-202ENST00000342294 SPTAN1Q13813 2472 aaKnown RBP17.13■□□□□ 0.33
TRA2B-202ENST00000342294 CXorf51AA0A1B0GTR3 108 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 GNA15P30679 374 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 CASRP41180 1078 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms