RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ATL1Q8WXF7 558 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 TFAP2BQ92481 460 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 PCDHB11Q9Y5F2 797 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 CNTFP26441 200 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 WNT3AP56704 352 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 OTUB2Q96DC9 234 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 MYH3P11055 1940 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 GLYATL1P3A0A0U1RQE8 302 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 NEMP2A6NFY4 417 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 L1CAMP32004 1257 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 NDST2P52849 883 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 GHRHRQ02643 423 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 ANKRD20A4Q4UJ75 823 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 GRTP1Q5TC63 336 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 RIBC1Q8N443 379 aaPredicted RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 OVCA2Q8WZ82 227 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 MAFFQ9ULX9 164 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 PADI4Q9UM07 663 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 MLNP12872 115 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 SETD3Q86TU7 594 aaPredicted RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 CRYBG2Q8N1P7 616 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 FBXO39Q8N4B4 442 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 ZNF366Q8N895 744 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 ISCUQ9H1K1 167 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 ABCG8Q9H221 673 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 KIF17Q9P2E2 1029 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 THEGQ9P2T0 379 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 CYP8B1Q9UNU6 501 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 FAM32AQ9Y421 112 aaKnown RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 LRIG2O94898 1065 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 LRPAP1P30533 357 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 PTPN9P43378 593 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 RGS1Q08116 209 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 RTL3Q8N8U3 475 aaKnown RBP12.94□□□□□ -0.34
LIN54-201ENST00000340417 TMEM40Q8WWA1 233 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 USP6NLQ92738 828 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 TUBGCP3Q96CW5 907 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 HMGXB4Q9UGU5 601 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 TTC36A6NLP5 189 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 EVPLLA8MZ36 301 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 EIF3HO15372 352 aaKnown RBP eCLIP12.93□□□□□ -0.34
LIN54-201ENST00000340417 NEK3P51956 506 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 FOXM1Q08050 763 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 ATXN7L2Q5T6C5 722 aaPredicted RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 KLHDC9Q8NEP7 349 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 ZNF398Q8TD17 642 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 FBXW11Q9UKB1 542 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 CCNDBP1O95273 360 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 AGTP01019 485 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 CRABP2P29373 138 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 TLX1P31314 330 aaPredicted RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 KCNK10P57789 538 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 SESN3P58005 492 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 AMZ1Q400G9 498 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 CLLU1OSQ5K130 101 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 DAB2IPQ5VWQ8 1189 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 FAM3CQ92520 227 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 GLOD4Q9HC38 313 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 ZDHHC7Q9NXF8 308 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 ELK3P41970 407 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 CLCN6P51797 869 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 FAM133BQ5BKY9 247 aaKnown RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 CNSTQ6PJW8 725 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 ENPP7Q6UWV6 458 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 RBFAQ8N0V3 343 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 KRT78Q8N1N4 520 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 CSPG4P5Q96PW8 444 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 ZBTB22O15209 634 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 PAPSS1O43252 624 aaPredicted RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 PRIM2P49643 509 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 KCNQ1P51787 676 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 PARGQ86W56 976 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 OTULINQ96BN8 352 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 CLIP3Q96DZ5 547 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 SLC39A8Q9C0K1 460 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 WWP1Q9H0M0 922 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 MIOSQ9NXC5 875 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 RCOR3Q9P2K3 495 aaPredicted RBP12.93□□□□□ -0.34
LIN54-201ENST00000340417 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 ZFP69BQ9UJL9 534 aa12.93□□□□□ -0.34
LIN54-201ENST00000340417 RFXAPO00287 272 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SPAM1P38567 509 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 PRUNE1Q86TP1 453 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms