RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 SUN2Q9UH99 717 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 RAB26Q9ULW5 256 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PCDHGA7Q9Y5G6 932 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CROCCQ5TZA2 2017 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SAC3D1A6NKF1 404 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 FBP2O00757 339 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 FYNP06241 537 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PSMC3P17980 439 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PRDX6P30041 224 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 MAPK10P53779 464 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 LRRC8EQ6NSJ5 796 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 HMBOX1Q6NT76 420 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ESRP1Q6NXG1 681 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 C4orf22Q6V702 233 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZYG11AQ6WRX3 759 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SMYD1Q8NB12 490 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PHF21BQ96EK2 531 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 TMEM79Q9BSE2 394 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 EIF2B3Q9NR50 452 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PRPF19Q9UMS4 504 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 HACD1B0YJ81 288 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 SDHDO14521 159 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 PSME3P61289 254 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 ANKDD1AQ495B1 522 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 RBM20Q5T481 1227 aaKnown RBP12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 LDB1Q86U70 411 aaPredicted RBP12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CHERPQ8IWX8 916 aaKnown RBP12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 AHI1Q8N157 1196 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 TSPAN14Q8NG11 270 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 ISL2Q96A47 359 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 PPWD1Q96BP3 646 aaKnown RBP12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 Q9H521 79 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 POMKQ9H5K3 350 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 FAM96AQ9H5X1 160 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZNF696Q9H7X3 374 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 IGSF9Q9P2J2 1179 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 DMTF1Q9Y222 760 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 ARHGEF37A1IGU5 675 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CHRM3P20309 590 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CYP2B6P20813 491 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 ADCYAP1R1P41586 468 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 TPI1P60174 286 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 ARHGAP1Q07960 439 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CSHL1Q14406 222 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 AGKQ53H12 422 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 FBXO48Q5FWF7 155 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 KIAA0319Q5VV43 1072 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CNTD1Q8N815 330 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 IPMKQ8NFU5 416 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 SLC2A11Q9BYW1 496 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 CASS4Q9NQ75 786 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 EBF1Q9UH73 591 aa12.09□□□□□ -0.47
CCDC144CP-201ENST00000340196 SOCS2O14508 198 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 IKBKEQ14164 716 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 METTL21CQ5VZV1 264 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 KCTD11Q693B1 232 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 ITPRIPL1Q6GPH6 555 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 CHST15Q7LFX5 561 aaPredicted RBP12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 STRADAQ7RTN6 431 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 ADCY4Q8NFM4 1077 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 C17orf50Q8WW18 174 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 EPB41L1Q9H4G0 881 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 EFCAB1Q9HAE3 211 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 RRAGCQ9HB90 399 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 GTF2IRD1Q9UHL9 959 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 AP4S1Q9Y587 144 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 PPP6CO00743 305 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 E2F6O75461 281 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 MT-ND1P03886 318 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 MPOP05164 745 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 USP17L7P0C7H9 530 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 TKTL1P51854 596 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 TAS2R39P59534 338 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 ANO4Q32M45 955 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 MARCH8Q5T0T0 291 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 ARHGAP17Q68EM7 881 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 PAQR9Q6ZVX9 377 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 FAM47BQ8NA70 645 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 STYXQ8WUJ0 223 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 HEXDCQ8WVB3 486 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 EXT2Q93063 718 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 SNX27Q96L92 541 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 GPR22Q99680 433 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 MCMBPQ9BTE3 642 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 ULBP1Q9BZM6 244 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 SNX25Q9H3E2 840 aa12.08□□□□□ -0.48
CCDC144CP-201ENST00000340196 EGFL7Q9UHF1 273 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms