RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FIBINQ8TAL6 211 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 SERAC1Q96JX3 654 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 SENP1Q9P0U3 644 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 TCAF1Q9Y4C2 921 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 ZNF197O14709 1029 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 SPAG7O75391 227 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 MT-CO1P00395 513 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 ZNF449Q6P9G9 518 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 SH2D5Q6ZV89 423 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 BBS5Q8N3I7 341 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 LRRC3BQ96PB8 259 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 LINC00597Q9H2U6 94 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 SLC28A3Q9HAS3 691 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 PIDD1Q9HB75 910 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 LHX3Q9UBR4 397 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 PRKAG3Q9UGI9 489 aa21.44■■□□□ 1.02
VRK2-201ENST00000340157 INTS6Q9UL03 887 aaKnown RBP21.44■■□□□ 1.02
VRK2-201ENST00000340157 IQANK1A0A1B0GTG1 560 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 TCF3P15923 654 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 KRT4P19013 534 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 BMPR2Q13873 1038 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 RASSF3Q86WH2 238 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 FEM1CQ96JP0 617 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 TRIB3Q96RU7 358 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 KLF6Q99612 283 aaPredicted RBP21.43■■□□□ 1.02
VRK2-201ENST00000340157 KCNK9Q9NPC2 374 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 SLC2A6Q9UGQ3 507 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 TYROBPO43914 113 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 PENKP01210 267 aaPredicted RBP21.43■■□□□ 1.02
VRK2-201ENST00000340157 SERPINF2P08697 491 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 ARNTP27540 789 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 SERPINH1P50454 418 aaKnown RBP21.43■■□□□ 1.02
VRK2-201ENST00000340157 SCNN1BP51168 640 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 INO80DQ53TQ3 878 aaPredicted RBP21.43■■□□□ 1.02
VRK2-201ENST00000340157 ELMSAN1Q6PJG2 1045 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 PACS1Q6VY07 963 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 CENPTQ96BT3 561 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 SFXN1Q9H9B4 322 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 MRM3Q9HC36 420 aaKnown RBP21.43■■□□□ 1.02
VRK2-201ENST00000340157 CDH22Q9UJ99 828 aa21.43■■□□□ 1.02
VRK2-201ENST00000340157 TRIM49D1C9J1S8 452 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 GOLGA8RI6L899 631 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 K7ERQ8 282 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 INSIG1O15503 277 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 PRPF4O43172 522 aaKnown RBP eCLIP21.42■■□□□ 1.02
VRK2-201ENST00000340157 GLP2RO95838 553 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 F7P08709 466 aaPredicted RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 CDK18Q07002 472 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 SLC14A2Q15849 920 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 ASTLQ6HA08 431 aaPredicted RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 ESRP1Q6NXG1 681 aaKnown RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 MICALCLQ6ZW33 695 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 ANKRD42Q8N9B4 389 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 PPHLN1Q8NEY8 458 aaKnown RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 PTCD2Q8WV60 388 aaKnown RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 RSPRY1Q96DX4 576 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 SMC6Q96SB8 1091 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 AGAP2Q99490 1192 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 MLXIPLQ9NP71 852 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 TREX1Q9NSU2 369 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 INTS9Q9NV88 658 aaKnown RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 KIAA1522Q9P206 1035 aaPredicted RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 ZMYM5Q9UJ78 669 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 FCF1Q9Y324 198 aaKnown RBP21.42■■□□□ 1.02
VRK2-201ENST00000340157 WNT6Q9Y6F9 365 aa21.42■■□□□ 1.02
VRK2-201ENST00000340157 A6NNZ2 444 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 ADRA1DP25100 572 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 HLA-FP30511 346 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 NAB1Q13506 487 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 LRRC14Q15048 493 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 PLEKHG6Q3KR16 790 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 TUBB8Q3ZCM7 444 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 HSP90AA5PQ58FG0 334 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 TEDDM1Q5T9Z0 273 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 MGARPQ8TDB4 240 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 CDKL2Q92772 493 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 NUDCD1Q96RS6 583 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 ZFATQ9P243 1243 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 FAM47DPA6NHR8 397 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 GOLGA8TH3BQL2 631 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 EPOP01588 193 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 CYBBP04839 570 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 SNRPAP09012 282 aaKnown RBP21.41■■□□□ 1.02
VRK2-201ENST00000340157 ARCN1P48444 511 aaKnown RBP21.41■■□□□ 1.02
VRK2-201ENST00000340157 GALNT3Q14435 633 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 KCNMB4Q86W47 210 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 DENND1AQ8TEH3 1009 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 IRF7Q92985 503 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 RANBP9Q96S59 729 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 SCUBE2Q9NQ36 999 aa21.41■■□□□ 1.02
VRK2-201ENST00000340157 C20orf96Q9NUD7 363 aaPredicted RBP21.41■■□□□ 1.02
VRK2-201ENST00000340157 NEDD8-MDP1E9PL57 170 aa21.4■■□□□ 1.02
VRK2-201ENST00000340157 SMAD6O43541 496 aaKnown RBP21.4■■□□□ 1.02
VRK2-201ENST00000340157 RFPL1O75677 317 aa21.4■■□□□ 1.02
VRK2-201ENST00000340157 KRT37O76014 449 aa21.4■■□□□ 1.02
VRK2-201ENST00000340157 PRLP01236 227 aa21.4■■□□□ 1.02
VRK2-201ENST00000340157 MT-ND3P03897 115 aa21.4■■□□□ 1.02
VRK2-201ENST00000340157 PRKCGP05129 697 aa21.4■■□□□ 1.02
VRK2-201ENST00000340157 RPA3P35244 121 aaPredicted RBP21.4■■□□□ 1.02
VRK2-201ENST00000340157 PLK1P53350 603 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms