RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 EI24O14681 340 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TFECO14948 347 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 PI15O43692 258 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM189A1O60320 539 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TSC22D2O75157 780 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 SNAP29O95721 258 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TFE3P19532 575 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TNNI2P48788 182 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 ST13P50502 369 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CHRNDQ07001 517 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 MGAT3Q09327 533 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CDC20Q12834 499 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 EPS8Q12929 822 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 BFSP1Q12934 665 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CLEC16AQ2KHT3 1053 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 C6orf10Q5SRN2 563 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 MBLAC2Q68D91 279 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TXNDC11Q6PKC3 985 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 NECAB2Q7Z6G3 386 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TXNRD3Q86VQ6 643 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 C10orf107Q8IVU9 208 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 ADGRF2Q8IZF7 708 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF781Q8N8C0 355 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 ANKRD53Q8N9V6 530 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 IL17RDQ8NFM7 739 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CANT1Q8WVQ1 401 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 DHX38Q92620 1227 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 FKBP10Q96AY3 582 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 IFT22Q9H7X7 185 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 LRRC40Q9H9A6 602 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 BARHL2Q9NY43 387 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 SNX6Q9UNH7 406 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 NOSIPQ9Y314 301 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 FRMPD2Q68DX3 1309 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 KDM3AQ9Y4C1 1321 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 A0A1B0GUL6 1792 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 MEGF6O75095 1541 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 LRRC72A6NJI9 287 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 PDPK1O15530 556 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 UPK1BO75841 260 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CPNE6O95741 557 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 SERPINB2P05120 415 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 FCER2P06734 321 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 MBL2P11226 248 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 NLRP11P59045 1033 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CD83Q01151 205 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 FMO1Q01740 532 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 LAPTM5Q13571 262 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 ADPRMQ3LIE5 342 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 AASDHQ4L235 1098 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 STYK1Q6J9G0 422 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 TMEM65Q6PI78 240 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 KIAA1324Q6UXG2 1013 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 GRPEL2Q8TAA5 225 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 CPA5Q8WXQ8 436 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 POMGNT1Q8WZA1 660 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 DLG3Q92796 817 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF668Q96K58 619 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 RMDN3Q96TC7 470 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 REEP2Q9BRK0 252 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 WACQ9BTA9 647 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 SMYD2Q9NRG4 433 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 PPP1R1BQ9UD71 204 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 XPO7Q9UIA9 1087 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 PTBP2Q9UKA9 531 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 PRPF19Q9UMS4 504 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 OAZ3Q9UMX2 235 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 DIMT1Q9UNQ2 313 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 PCDHB4Q9Y5E5 795 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 SNCAIPQ9Y6H5 919 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 COL14A1Q05707 1796 aaKnown RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ISPDA4D126 451 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM25EA8MYX2 175 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF195O14628 629 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 EDIL3O43854 480 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ATG13O75143 517 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 PRKD3O94806 890 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 OR5F1O95221 314 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 FSHRP23945 695 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 IL12AP29459 219 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 SHMT2P34897 504 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 NUDT1P36639 197 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ACTR2P61160 394 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ILF2Q12905 390 aaKnown RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CTF1Q16619 201 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 SYCE2Q6PIF2 218 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 METTL4Q8N3J2 472 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 LHFPL5Q8TAF8 219 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 NSUN6Q8TEA1 469 aaKnown RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 RIT1Q92963 219 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ROGDIQ9GZN7 287 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 DPEP3Q9H4B8 488 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 SLA2Q9H6Q3 261 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF358Q9NW07 568 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 COPG2Q9UBF2 871 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 V9GYQ6 96 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms