RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 HIPK4Q8NE63 616 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 SREK1Q8WXA9 508 aaKnown RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 PYDC1Q8WXC3 89 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 OSBPL2Q9H1P3 480 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 MPP6Q9NZW5 540 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 AAR2Q9Y312 384 aaKnown RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 MYO16Q9Y6X6 1858 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 LIN7AO14910 233 aaPredicted RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 MAFKO60675 156 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 SBK3P0C264 359 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 TYMPP19971 482 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 CCNCP24863 283 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 GRIK1P39086 918 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 GRIA4P48058 902 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 ZNF135P52742 658 aaPredicted RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 SLC5A3P53794 718 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 YWHAHQ04917 246 aaPredicted RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 PKN3Q6P5Z2 889 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 DEFB107AQ8IZN7 70 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 FAM136AQ96C01 138 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 CMTM5Q96DZ9 223 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 FCRL2Q96LA5 508 aaPredicted RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 TSNARE1Q96NA8 513 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 PKMYT1Q99640 499 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 C1QTNF1Q9BXJ1 281 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 RHOJQ9H4E5 214 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 GLOD4Q9HC38 313 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 MARCH5Q9NX47 278 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 ARHGEF38Q9NXL2 777 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 PRKAG2Q9UGJ0 569 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 ARHGEF37A1IGU5 675 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 IGLV3-25P01717 112 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 HLA-DQB2P05538 268 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 GALTP07902 379 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 SLC35E2BP0CK96 405 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 MYL4P12829 197 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 ITGAXP20702 1163 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 SERPINB5P36952 375 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 CHRNA4P43681 627 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 TCHHL1Q5QJ38 904 aaPredicted RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 TMEM154Q6P9G4 183 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 TMEM151AQ8N4L1 468 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 TSGA13Q96PP4 275 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 NDE1Q9NXR1 346 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 CORO1CQ9ULV4 474 aaPredicted RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 LRCH1Q9Y2L9 728 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 LTBP2Q14767 1821 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 DPPA5A6NC42 116 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 COX4I1P13073 169 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 NAGLUP54802 743 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 KLF10Q13118 480 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 SEPT6Q14141 434 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 PCSK7Q16549 785 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 DENND5AQ6IQ26 1287 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 TMEM173Q86WV6 379 aaPredicted RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 CEP97Q8IW35 865 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 MFSD6LQ8IWD5 586 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 ZNF184Q99676 751 aaPredicted RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 GPR62Q9BZJ7 368 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 ILKAPQ9H0C8 392 aaPredicted RBP16.5■□□□□ 0.23
LITAF-201ENST00000339430 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
LITAF-201ENST00000339430 A6NHS1 94 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 PIGNO95427 931 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 EPHA3P29320 983 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 FAM171A1Q5VUB5 890 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 LIPMQ5VYY2 423 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 ZYG11AQ6WRX3 759 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 C14orf80Q86SX3 495 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 HPS6Q86YV9 775 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 SPATA2LQ8IUW3 424 aaPredicted RBP16.49■□□□□ 0.23
LITAF-201ENST00000339430 SCN4BQ8IWT1 228 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 CENPLQ8N0S6 344 aaPredicted RBP16.49■□□□□ 0.23
LITAF-201ENST00000339430 FSTL5Q8N475 847 aaPredicted RBP16.49■□□□□ 0.23
LITAF-201ENST00000339430 SLC26A7Q8TE54 656 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 BADQ92934 168 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 FCRL5Q96RD9 977 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 OMDQ99983 421 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 NMUR1Q9HB89 426 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 IL23AQ9NPF7 189 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 ABCC13Q9NSE7 274 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 RBM22Q9NW64 420 aaKnown RBP eCLIP16.49■□□□□ 0.23
LITAF-201ENST00000339430 CDH22Q9UJ99 828 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 PACSIN3Q9UKS6 424 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 MIA3Q5JRA6 1907 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 PSMD3O43242 534 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 CACNG3O60359 315 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 ARNTP27540 789 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 CCR1P32246 355 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 EIF4EBP2Q13542 120 aaPredicted RBP16.49■□□□□ 0.23
LITAF-201ENST00000339430 CNGA3Q16281 694 aa16.49■□□□□ 0.23
LITAF-201ENST00000339430 ARL13AQ5H913 290 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms