RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 CDH1P12830 882 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 GRIA3P42263 894 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
DFFB-202ENST00000339350 TTC39BQ5VTQ0 682 aaPredicted RBP12.75□□□□□ -0.37
DFFB-202ENST00000339350 CHSY1Q86X52 802 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 MTMR14Q8NCE2 650 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 RDM1Q8NG50 284 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 NLRP4Q96MN2 994 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 CITED4Q96RK1 184 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 TMEM79Q9BSE2 394 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 PPCSQ9HAB8 311 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 PLAC1Q9HBJ0 212 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 NGRNQ9NPE2 291 aaKnown RBP12.75□□□□□ -0.37
DFFB-202ENST00000339350 FER1L6Q2WGJ9 1857 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 C7orf72A4D263 438 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 AURKAO14965 403 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 C8BP07358 591 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 ALOX5P09917 674 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 MCF2P10911 925 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 EPHA3P29320 983 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 PTPN7P35236 360 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 ATXN3P54252 364 aaPredicted RBP12.75□□□□□ -0.37
DFFB-202ENST00000339350 GHRHRQ02643 423 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 KCNJ11Q14654 390 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 OR6B2Q6IFH4 312 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 ZNF600Q6ZNG1 722 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 FIBCD1Q8N539 461 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 NIPA2Q8N8Q9 360 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 C7orf26Q96N11 449 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 STN1Q9H668 368 aaKnown RBP12.75□□□□□ -0.37
DFFB-202ENST00000339350 ACSS2Q9NR19 701 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 RIMS3Q9UJD0 308 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 PLLPQ9Y342 182 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
DFFB-202ENST00000339350 POLR2AP24928 1970 aaKnown RBP12.75□□□□□ -0.37
DFFB-202ENST00000339350 LOC100653049A0A140TA62 436 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 M0QX08 132 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 MEN1O00255 615 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 PLOD2O00469 737 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 RFPL1O75677 317 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 KRT34O76011 436 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 ATG7O95352 703 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 PRLP01236 227 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 OPRL1P41146 370 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 HSPA13P48723 471 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 IFITM3Q01628 133 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 PMS2P3Q13401 168 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 CA9Q16790 459 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.74□□□□□ -0.37
DFFB-202ENST00000339350 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 VWA5B1Q5TIE3 1220 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 EEF1DP3Q658K8 133 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 ADCY4Q8NFM4 1077 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 CDC26Q8NHZ8 85 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 HDAC2Q92769 488 aaKnown RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 KCNK4Q9NYG8 393 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 STMN3Q9NZ72 180 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 RGPD3A6NKT7 1758 aaPredicted RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 RGPD4Q7Z3J3 1758 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 FAM172BPA6NC97 362 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 HDAC3O15379 428 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 KRT37O76014 449 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 MICAL2O94851 1124 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 HOXC6P09630 235 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 PTPN1P18031 435 aaKnown RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 MAP4P27816 1152 aaKnown RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 ADORA2AP29274 412 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 MSX2P35548 267 aaPredicted RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 GALK2Q01415 458 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 GALNT2Q10471 571 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 NFATC3Q12968 1075 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 CYP20A1Q6UW02 462 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 ASCC1Q8N9N2 400 aaKnown RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 CATSPER1Q8NEC5 780 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 AGR3Q8TD06 166 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 RXFP2Q8WXD0 754 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 PKP2Q99959 881 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 CEP41Q9BYV8 373 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 WDR70Q9NW82 654 aa12.74□□□□□ -0.37
DFFB-202ENST00000339350 ZNF214Q9UL59 606 aaPredicted RBP12.74□□□□□ -0.37
DFFB-202ENST00000339350 ZNF839A8K0R7 811 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 FAM189A1O60320 539 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 MSCO60682 206 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 PDGFRAP16234 1089 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 OSBPP22059 807 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 TGM1P22735 817 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 KRT20P35900 424 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 SLC26A2P50443 739 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 PRAMEP78395 509 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 TAP1Q03518 808 aa12.73□□□□□ -0.37
DFFB-202ENST00000339350 CLCQ05315 142 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms