RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 NOD2Q9HC29 1040 aa14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 ARFGAP3Q9NP61 516 aa14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 SLCO3A1Q9UIG8 710 aa14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 DUSP12Q9UNI6 340 aa14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 STARD13Q9Y3M8 1113 aa14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 ARIH1Q9Y4X5 557 aaPredicted RBP14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 CKAP5Q14008 2032 aa14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
NIPAL3-202ENST00000339255 GOLGA8MH3BSY2 632 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 PMPCBO75439 489 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 ZNF821O75541 412 aaPredicted RBP14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 MAGEA3P43357 314 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 RGRP47804 291 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 SOX9P48436 509 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 WNT3AP56704 352 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 SKOR1P84550 965 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 CDH17Q12864 832 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 FNDC3BQ53EP0 1204 aaKnown RBP14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 DGKKQ5KSL6 1271 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 FAM182AQ5T1J6 154 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 LRRC8BQ6P9F7 803 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 KDELC1Q6UW63 502 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 SRLQ86TD4 932 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 RELL1Q8IUW5 271 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 GSPT2Q8IYD1 628 aaKnown RBP14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 KCNV2Q8TDN2 545 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 CYB5D2Q8WUJ1 264 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 SORCS1Q8WY21 1168 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 LRRC39Q96DD0 335 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 MYO19Q96H55 970 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 SERPINB12Q96P63 405 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 TBL1YQ9BQ87 522 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 TM6SF2Q9BZW4 377 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 ATP13A3Q9H7F0 1226 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 PRDM6Q9NQX0 595 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 HEBP1Q9NRV9 189 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 UBP1Q9NZI7 540 aa14.71□□□□□ -0.06
NIPAL3-202ENST00000339255 SOCS5O75159 536 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 POP4O95707 220 aaKnown RBP14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 HLA-DPA1P20036 260 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 DRD1P21728 446 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 ADRA1AP35348 466 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 GRSF1Q12849 480 aaKnown RBP eCLIP14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 SYCP2LQ5T4T6 812 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 ATXN7L2Q5T6C5 722 aaPredicted RBP14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 NAIF1Q69YI7 327 aaPredicted RBP14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 RANBP10Q6VN20 620 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 TMC3Q7Z5M5 1100 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 FRS2Q8WU20 508 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 IFT43Q96FT9 208 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 MRGPRX2Q96LB1 330 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 ADGRE3Q9BY15 652 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 CPEB1Q9BZB8 566 aaKnown RBP14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 ARNT2Q9HBZ2 717 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 SORCS3Q9UPU3 1222 aa14.7□□□□□ -0.06
NIPAL3-202ENST00000339255 EDDM13A0A1B0GTR0 161 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 WASH3PC4AMC7 463 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 E7ESA3 106 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 HNRNPLP14866 589 aaKnown RBP eCLIP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 SERPINA4P29622 427 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 GALK1P51570 392 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 RPL26P61254 145 aaKnown RBP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 CARD16Q5EG05 197 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 TMEM196Q5HYL7 178 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 FBXO38Q6PIJ6 1188 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 NCEH1Q6PIU2 408 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 SERPINA13PQ6UXR4 307 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 Q6ZVU0 165 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 ZNF534Q76KX8 674 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 CAND1Q86VP6 1230 aaKnown RBP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 CCDC25Q86WR0 208 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 MREGQ8N565 214 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 DNAAF3Q8N9W5 541 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 ATXN2LQ8WWM7 1075 aaKnown RBP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 ANKRD7Q92527 254 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 LRIG1Q96JA1 1093 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 FICDQ9BVA6 458 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 TDRD1Q9BXT4 1180 aaKnown RBP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 TNKS2Q9H2K2 1166 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 TMEM245Q9H330 911 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 CASS4Q9NQ75 786 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 BFARQ9NZS9 450 aa14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 THAP10Q9P2Z0 257 aaPredicted RBP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 RPL26L1Q9UNX3 145 aaKnown RBP14.69□□□□□ -0.06
NIPAL3-202ENST00000339255 LOC285095A0A1B0GVY8 99 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 MAN2B1O00754 1011 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 NARSO43776 548 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 NDST3O95803 873 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 FGF1P05230 155 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 FAM153BP0C7A2 387 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 CCNHP51946 323 aaPredicted RBP14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 CDK18Q07002 472 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 DHX9Q08211 1270 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 ZNF234Q14588 700 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 PCSK7Q16549 785 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 MYLK3Q32MK0 819 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 HNRNPA1L2Q32P51 320 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 FAM153CQ494X1 144 aa14.68□□□□□ -0.06
NIPAL3-202ENST00000339255 FBXO43Q4G163 708 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms