RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ANKS4BQ8N8V4 417 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 MRPL43Q8N983 215 aaKnown RBP22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 CCDC63Q8NA47 563 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 SP7Q8TDD2 431 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 TADA1Q96BN2 335 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 NSMCE3Q96MG7 304 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 DDX50Q9BQ39 737 aaKnown RBP22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 EMILIN2Q9BXX0 1053 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 ARNT2Q9HBZ2 717 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 STOML2Q9UJZ1 356 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 USP15Q9Y4E8 981 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 CHD5Q8TDI0 1954 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 OBSL1O75147 1896 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 MIA3Q5JRA6 1907 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 SPRP35270 261 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 CCR2P41597 374 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 ARCN1P48444 511 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 LIMK2P53671 638 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 GALNT3Q14435 633 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 DLG2Q15700 870 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 WFDC5Q8TCV5 224 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 TMA16Q96EY4 203 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 ZNF599Q96NL3 588 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 CINPQ9BW66 212 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 CFAP97Q9P2B7 532 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 CCL22O00626 93 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 ATXN1LP0C7T5 689 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 SCNN1BP51168 640 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 MSLNQ13421 630 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 Q6ZNB5 142 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 SPATS2Q86XZ4 545 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 PNPLA1Q8N8W4 532 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 SPPL3Q8TCT6 385 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 ACE2Q9BYF1 805 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 NOD2Q9HC29 1040 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 SNX15Q9NRS6 342 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 TREX1Q9NSU2 369 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 PLK2Q9NYY3 685 aa22.67■■□□□ 1.22
PDLIM2-203ENST00000339162 EDF1O60869 148 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 PIRTP0C851 137 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 SAT1P21673 171 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 IRS1P35568 1242 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 MPP1Q00013 466 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 CCDC117Q8IWD4 279 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 ELMOD1Q8N336 334 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 HERVK_113Q902F9 699 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 IFT43Q96FT9 208 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 SEPT3Q9UH03 358 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 GGA2Q9UJY4 613 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 LOC285095A0A1B0GVY8 99 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 KIAA0754O94854 1291 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 GABRB3P28472 473 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 ARF5P84085 180 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 OTOAQ7RTW8 1153 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 BBS7Q8IWZ6 715 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 VPS39Q96JC1 886 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 PSKH2Q96QS6 385 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 SLC46A2Q9BY10 475 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 RETREG1Q9H6L5 497 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 ASAH2Q9NR71 780 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 ZNF358Q9NW07 568 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 MKS1Q9NXB0 559 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 KCTD3Q9Y597 815 aa22.66■■□□□ 1.22
PDLIM2-203ENST00000339162 CCDC195A0A1B0GUA6 201 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 LINC01553A4QN01 128 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 HGSO14964 777 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 BUD23O43709 281 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 AHSGP02765 367 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 CDK18Q07002 472 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 OVGP1Q12889 678 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 ITIH4Q14624 930 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 SPRED3Q2MJR0 410 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 PPM1LQ5SGD2 360 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 TPGS1Q6ZTW0 290 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 PTCD2Q8WV60 388 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 TCEAL4Q96EI5 215 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 MGME1Q9BQP7 344 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 TLR9Q9NR96 1032 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 PRKAG3Q9UGI9 489 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 IRAK3Q9Y616 596 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 HEATR9A2RTY3 570 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 SERPINF2P08697 491 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 CLCN4P51793 760 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 GRM3Q14832 879 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 CYTH1Q15438 398 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 N4BP2L1Q5TBK1 243 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 BBS5Q8N3I7 341 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 MCMBPQ9BTE3 642 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 MRM3Q9HC36 420 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 EMCNQ9ULC0 261 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 SH3BP1Q9Y3L3 701 aa22.65■■□□□ 1.22
PDLIM2-203ENST00000339162 GRXCR1A8MXD5 290 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 CD160O95971 181 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 CDH18Q13634 790 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 OTUD6BQ8N6M0 293 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 HJURPQ8NCD3 748 aaPredicted RBP22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 BLOC1S5Q8TDH9 187 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 ACMSDQ8TDX5 336 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 DDI1Q8WTU0 396 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 VPS28Q9UK41 221 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms