RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PLOD1Q02809 727 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 TRAF7Q6Q0C0 670 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 BNC2Q6ZN30 1099 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 LRRTM3Q86VH5 581 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 CHERPQ8IWX8 916 aaKnown RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 RIN3Q8TB24 985 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF296Q8WUU4 475 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 WDR6Q9NNW5 1121 aaKnown RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 TBCCD1Q9NVR7 557 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 SEPT10Q9P0V9 454 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 TDRD15B5MCY1 1934 aaKnown RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 PIK3R1P27986 724 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 SERPINB5P36952 375 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 TUSC3Q13454 348 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 PDK1Q15118 436 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 PPM1JQ5JR12 505 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 LRRC8BQ6P9F7 803 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 C4orf22Q6V702 233 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF598Q86UK7 904 aaKnown RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 OR52B2Q96RD2 323 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 ACBD6Q9BR61 282 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 FAIMQ9NVQ4 179 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 SH3GLB1Q9Y371 365 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 MSX2P35548 267 aaPredicted RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 MAGEA10P43363 369 aaPredicted RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 ALDH3B2P48448 385 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 CEACAM7Q14002 265 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 PPM1LQ5SGD2 360 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 DHRS4L2Q6PKH6 230 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 SNX32Q86XE0 403 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 TMEM102Q8N9M5 508 aaPredicted RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 BHLHE22Q8NFJ8 381 aaPredicted RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 TSPAN14Q8NG11 270 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 OR10T2Q8NGX3 314 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 DLG3Q92796 817 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 P2RY11Q96G91 374 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 CNDP1Q96KN2 507 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 TSEN34Q9BSV6 310 aaKnown RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 HAUS8Q9BT25 410 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 BCAP29Q9UHQ4 241 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 CNOT11Q9UKZ1 510 aaKnown RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 RNF11Q9Y3C5 154 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 PSAT1Q9Y617 370 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 RGSL1A5PLK6 1076 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 GNRH1P01148 92 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 PSMC3P17980 439 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 GRK4P32298 578 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 INTS6LQ5JSJ4 861 aaKnown RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 FAM171BQ6P995 826 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 POTEHQ6S545 545 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 ZBTB8BQ8NAP8 495 aaPredicted RBP19■□□□□ 0.63
PSPC1-201ENST00000338910 COLGALT1Q8NBJ5 622 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 RSPH1Q8WYR4 309 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 BIRC8Q96P09 236 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 PRDM12Q9H4Q4 367 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 CSNK1G1Q9HCP0 422 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 TCF7L2Q9NQB0 619 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 FBXW11Q9UKB1 542 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 SQORQ9Y6N5 450 aa19■□□□□ 0.63
PSPC1-201ENST00000338910 A0A0A0MRY4 1105 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 WDR27A2RRH5 827 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 HACD1B0YJ81 288 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF26P17031 533 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-201ENST00000338910 MX2P20592 715 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 GMPRP36959 345 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 CBX3Q13185 183 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 DPYSQ14117 519 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 OVOS1Q6IE37 1185 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 BHLHA9Q7RTU4 235 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 SLAIN1Q8ND83 568 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 TMIGD2Q96BF3 282 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 SPATA13Q96N96 652 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 CCT7Q99832 543 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 FERMT1Q9BQL6 677 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 PIH1D1Q9NWS0 290 aaKnown RBP18.99■□□□□ 0.63
PSPC1-201ENST00000338910 HEMK1Q9Y5R4 338 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-201ENST00000338910 SNX10Q9Y5X0 201 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 RNF103O00237 685 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 ERCC2P18074 760 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-201ENST00000338910 BSPRYQ5W0U4 402 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 NAPRTQ6XQN6 538 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 Q6ZNX1 250 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 CROCCP3Q8IVE0 287 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 SMYD1Q8NB12 490 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 SCAMP5Q8TAC9 235 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 CDKL2Q92772 493 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 SLC9A7Q96T83 725 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 LIN28AQ9H9Z2 209 aaKnown RBP18.99■□□□□ 0.63
PSPC1-201ENST00000338910 RGS18Q9NS28 235 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF358Q9NW07 568 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 ZNHIT2Q9UHR6 403 aa18.99■□□□□ 0.63
PSPC1-201ENST00000338910 MYO18AQ92614 2054 aaKnown RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 C9IYK1 514 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 BCAS2O75934 225 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 HSPA4LO95757 839 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 MYCP01106 439 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 VARSP26640 1264 aaKnown RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 CD97P48960 835 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms