RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FAM118BQ9BPY3 351 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 MGME1Q9BQP7 344 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SUV39H2Q9H5I1 410 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 KLHL8Q9P2G9 620 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 RNF14Q9UBS8 474 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SARDHQ9UL12 918 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 ZNF148Q9UQR1 794 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 DRG1Q9Y295 367 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 R3HDM2Q9Y2K5 976 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 HCN4Q9Y3Q4 1203 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 TTLL3Q9Y4R7 772 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 MIA3Q5JRA6 1907 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 ZDBF2Q9HCK1 2354 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 A0A1W2PQ67 120 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 KIF2AO00139 706 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 RNF103O00237 685 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 PGRMC1O00264 195 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 MUSKO15146 869 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 KCNN4O15554 427 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 LIASO43766 372 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 NDUFS2O75306 463 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 RPP40O75818 363 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 UGT2B4P06133 528 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CTSLP07711 333 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CR2P20023 1033 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CA4P22748 312 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 XPAP23025 273 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 PTPN3P26045 913 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CD6P30203 668 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 GKP32189 559 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 P2RY2P41231 377 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 PAFAH1B1P43034 410 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 RGRP47804 291 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 MAXP61244 160 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 POLR2LP62875 67 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 MAP7D1Q3KQU3 841 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 FBXL19Q6PCT2 694 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 ERN2Q76MJ5 926 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CEP68Q76N32 757 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CACUL1Q86Y37 369 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CNTD1Q8N815 330 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 COG1Q8WTW3 980 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 GAB3Q8WWW8 586 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 RLN3Q8WXF3 142 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 ATOH1Q92858 354 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 MS4A14Q96JA4 679 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 HDAC8Q9BY41 377 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 BTBD1Q9H0C5 482 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 SLC25A51Q9H1U9 297 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 NEUROG2Q9H2A3 272 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 C10orf88Q9H8K7 445 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 SGK2Q9HBY8 427 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 NOD2Q9HC29 1040 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 GLOD4Q9HC38 313 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 USP36Q9P275 1121 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 DKK3Q9UBP4 350 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 DNPEPQ9ULA0 475 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 FZD4Q9ULV1 537 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CYP8B1Q9UNU6 501 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 INVSQ9Y283 1065 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 VCANP13611 3396 aa12.05□□□□□ -0.48
SPTLC1-202ENST00000337841 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 GOLGA6L10A0A0M3HER8 536 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 A0A1W2PP55 124 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 TTC24A2A3L6 582 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 C5orf60A6NFR6 353 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 C16orf96A6NNT2 1141 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 SLC7A4O43246 635 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 HRO43593 1189 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 IGLV3-19P01714 112 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 HLA-DQB2P05538 268 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 SERPINF2P08697 491 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 ITGB7P26010 798 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 ACTN2P35609 894 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 SUOXP51687 545 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 DSC2Q02487 901 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 LMNB2Q03252 620 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 WASHC5Q12768 1159 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 CNTN1Q12860 1018 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 ZBTB17Q13105 803 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 SNX1Q13596 522 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 PRPSAP1Q14558 356 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 POM121L1PQ3SYA9 428 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 DRICH1Q6PGQ1 229 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 BRAT1Q6PJG6 821 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 FAM124AQ86V42 546 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 CAMK1DQ8IU85 385 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 NDUFAF2Q8N183 169 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 AADATQ8N5Z0 425 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 PRSS33Q8NF86 280 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms