RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MAGEC3Q8TD91 643 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TINF2Q9BSI4 451 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 REXO4Q9GZR2 422 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 DENND2DQ9H6A0 471 aaPredicted RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 KLHL28Q9NXS3 571 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ENOPH1Q9UHY7 261 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 SPACA6W5XKT8 324 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CLDN5O00501 218 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TM7SF2O76062 418 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 MLYCDO95822 493 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 NTRK1P04629 796 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 PIRTP0C851 137 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TM4SF1P30408 202 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 MAXP61244 160 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ITGADQ13349 1161 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ASTE1Q2TB18 679 aaPredicted RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 MAP1SQ66K74 1059 aaPredicted RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 ABRAXAS1Q6UWZ7 409 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 STRADAQ7RTN6 431 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CROCCP3Q8IVE0 287 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TRIM48Q8IWZ4 208 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ZFP42Q96MM3 310 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CSPG4P5Q96PW8 444 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CNGB3Q9NQW8 809 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 GRHL1Q9NZI5 618 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 VWA7Q9Y334 891 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 PDE4DIPQ5VU43 2346 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 PLSCR1O15162 318 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TYMPP19971 482 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ATP5C1P36542 298 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 IDH2P48735 452 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 SLC7A2P52569 658 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 RAB14P61106 215 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 IRF8Q02556 426 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TRAF3Q13114 568 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ANGPT1Q15389 498 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 HSDL1Q3SXM5 330 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 FNBP1LQ5T0N5 605 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 RBM44Q6ZP01 1051 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 HDAC10Q969S8 669 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 RNFT2Q96EX2 444 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 C1orf50Q9BV19 199 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 DMAC2Q9NW81 257 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 C3orf18Q9UK00 162 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 BTRCQ9Y297 605 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 AK5Q9Y6K8 562 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 NID2Q14112 1375 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 IGLV3-22A0A075B6J6 115 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ULK1O75385 1050 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ALDH1A2O94788 518 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ETS2P15036 469 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ALOX12P18054 663 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 HSPA14Q0VDF9 509 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 RNASEH2BQ5TBB1 312 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 XYLT1Q86Y38 959 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CLPTM1LQ96KA5 538 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 OSBPL11Q9BXB4 747 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ZYG11BQ9C0D3 744 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 LGALS13Q9UHV8 139 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 NOCTQ9UK39 431 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 EPN2O95208 641 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 IGSF6O95976 241 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ANXA5P08758 320 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ADRA1BP35368 520 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 HADHBP55084 474 aaKnown RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 FGD3Q5JSP0 725 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 LPCAT4Q643R3 524 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 C16orf59Q7L2K0 433 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 C10orf53Q8N6V4 93 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 MTFMTQ96DP5 389 aaKnown RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 EGFL7Q9UHF1 273 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 PSMD13Q9UNM6 376 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 AZIN1O14977 448 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 SNAP91O60641 907 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 TGDSO95455 350 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 UQCRBP14927 111 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 GRM5P41594 1212 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 WNT3AP56704 352 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 FSTL1Q12841 308 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 INSCQ1MX18 579 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ZNF605Q86T29 641 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 HPS6Q86YV9 775 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 C7orf26Q96N11 449 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 MRPL45Q9BRJ2 306 aaKnown RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 MLPHQ9BV36 600 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms