RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 SPATA24Q86W54 205 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 GALNT4Q8N4A0 578 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 CYP2S1Q96SQ9 504 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 NPAS2Q99743 824 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 FAM96AQ9H5X1 160 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 ALG9Q9H6U8 611 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 CCDC167Q9P0B6 97 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 UXTQ9UBK9 157 aaPredicted RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 ZNF212Q9UDV6 495 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MID2Q9UJV3 735 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 ADAM28Q9UKQ2 775 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 SHROOM3Q8TF72 1996 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 ITGAXP20702 1163 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 CCNCP24863 283 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 PIK3R1P27986 724 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 HCAR3P49019 387 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 USP46P62068 366 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 CYLC2Q14093 348 aaPredicted RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 GALNT3Q14435 633 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 C17orf99Q6UX52 265 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 SCD5Q86SK9 330 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MAB21L3Q8N8X9 362 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 RMDN1Q96DB5 314 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 OSER1Q9NX31 292 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 POMPQ9Y244 141 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 C9JVG2 144 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 CA8P35219 290 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 CSE1LP55060 971 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 GRIK3Q13003 919 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 TUBB3Q13509 450 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 FLOT2Q14254 428 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 FAM83EQ2M2I3 478 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 RASIP1Q5U651 963 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 RGMBQ6NW40 437 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 KLC3Q6P597 504 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 ARHGAP12Q8IWW6 846 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 GBP5Q96PP8 586 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 NCKIPSDQ9NZQ3 722 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 RAP2CQ9Y3L5 183 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 ACTL7AQ9Y615 435 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 HTTP42858 3142 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 NCF1BA6NI72 391 aaPredicted RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 NCF1CA8MVU1 366 aaPredicted RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 B4GALT3O60512 393 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 IL1BP01584 269 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 NCF1P14598 390 aaPredicted RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 HDCP19113 662 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 PEX2P28328 305 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 HARS2P49590 506 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 RAP1GDS1P52306 607 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 MRPS35P82673 323 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 PRKAA1Q13131 559 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 ZNF235Q14590 738 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 TAF12Q16514 161 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 HABP4Q5JVS0 413 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 CLEC6AQ6EIG7 209 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 PM20D1Q6GTS8 502 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 EPGNQ6UW88 154 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 BHLHA9Q7RTU4 235 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 LIMS2Q7Z4I7 341 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 RASAL3Q86YV0 1011 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 KYQ8NBH2 561 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 GDPD5Q8WTR4 605 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 SERPINB11Q96P15 392 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 GCNAQ96QF7 691 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 GPR22Q99680 433 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 UBE2OQ9C0C9 1292 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 PRDM16Q9HAZ2 1276 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 ENTPD7Q9NQZ7 604 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 DNAJC28Q9NX36 388 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 HCSTQ9UBK5 93 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 DSEQ9UL01 958 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 MTF2Q9Y483 593 aaPredicted RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 TCAF1Q9Y4C2 921 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 SF3B1O75533 1304 aaKnown RBP eCLIP9.81□□□□□ -0.849e-7■■■■■ 57.4
MSL3-202ENST00000337339 CCDC160A6NGH7 325 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 CABYRO75952 493 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 THRAP10827 490 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 ACADSP16219 412 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 PSEN1P49768 467 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 SERPINH1P50454 418 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 RENBPP51606 427 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 TAF10Q12962 218 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 GPR158Q5T848 1215 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 PIM3Q86V86 326 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 CENPLQ8N0S6 344 aaPredicted RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 NUP93Q8N1F7 819 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 TBATAQ96M53 351 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 SEMA3CQ99985 751 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 ZCWPW1Q9H0M4 648 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 MRPL46Q9H2W6 279 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 S100A14Q9HCY8 104 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 SARS2Q9NP81 518 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 RPL26L1Q9UNX3 145 aaKnown RBP9.81□□□□□ -0.84
MSL3-202ENST00000337339 SORCS3Q9UPU3 1222 aa9.81□□□□□ -0.84
MSL3-202ENST00000337339 FAM50BQ9Y247 325 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms