RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GSTA4O15217 222 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 HDAC3O15379 428 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 GPR42O15529 346 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 THOP1P52888 689 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 FOLH1Q04609 750 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 DPYSL2Q16555 572 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 KYAT1Q16773 422 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SLC9A4Q6AI14 798 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 LRRC8BQ6P9F7 803 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SATL1Q86VE3 508 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 DSELQ8IZU8 1212 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CXorf38Q8TB03 319 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 MPP4Q96JB8 637 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SMIM14Q96QK8 99 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 NAT9Q9BTE0 207 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 EFHD1Q9BUP0 239 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CATSPERBQ9H7T0 1116 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 LIN28AQ9H9Z2 209 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 VCX3AQ9NNX9 186 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 TRMT13Q9NUP7 481 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 EFR3BQ9Y2G0 817 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 THSD7AQ9UPZ6 1657 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ATP8B3O60423 1300 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 MICAL3Q7RTP6 2002 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 J3KR12 359 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 JUNP05412 331 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 ITGB1P05556 798 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 LYNP07948 512 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF23P17027 643 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PCLAFQ15004 111 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 UGP2Q16851 508 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 TAPT1Q6NXT6 567 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF598Q86UK7 904 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 UNC93AQ86WB7 457 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 CCDC117Q8IWD4 279 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 GFM2Q969S9 779 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 PSMG2Q969U7 264 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF333Q96JL9 665 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 QKIQ96PU8 341 aaKnown RBP eCLIP8.31□□□□□ -1.08
HPS4-201ENST00000336873 ARMC7Q9H6L4 198 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 NOL11Q9H8H0 719 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 DMAP1Q9NPF5 467 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 CRTAC1Q9NQ79 661 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 STX18Q9P2W9 335 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNHIT2Q9UHR6 403 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 FZD10Q9ULW2 581 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PADI3Q9ULW8 664 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 AAR2Q9Y312 384 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 LTBP3Q9NS15 1303 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 DOCK5Q9H7D0 1870 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ARHGAP10A1A4S6 786 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ARL5CA6NH57 179 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 MRASO14807 208 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ANXA9O76027 345 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PRSS56P0CW18 603 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 UGT1A6P19224 532 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 CREB5Q02930 508 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 WASHC5Q12768 1159 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 TCEA2Q15560 299 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 VPS26BQ4G0F5 336 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 SFT2D3Q587I9 215 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF789Q5FWF6 425 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF410Q86VK4 478 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 KBTBD2Q8IY47 623 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 CLEC4FQ8N1N0 589 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF483Q8TF39 744 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 HEXDCQ8WVB3 486 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ULK4Q96C45 1275 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZBED3Q96IU2 234 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 SMOQ99835 787 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 THUMPD3Q9BV44 507 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 SLC39A8Q9C0K1 460 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PGAP2Q9UHJ9 254 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF112Q9UJU3 913 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 RNF112Q9ULX5 631 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 VCANP13611 3396 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 MCM3APO60318 1980 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ARHGEF37A1IGU5 675 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 STRNO43815 780 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZBTB14O43829 449 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 NOL3O60936 208 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 GCATO75600 419 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 GJB3O75712 270 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 CTPS1P17812 591 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ME2P23368 584 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PAX3P23760 479 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 RPL10P27635 214 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 LHX1P48742 406 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 SLC7A2P52569 658 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 SLC5A3P53794 718 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 SLC10A7Q0GE19 358 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 LBRQ14739 615 aaKnown RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 PLCL1Q15111 1095 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PDK3Q15120 406 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 LRRC73Q5JTD7 316 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 SPANXN3Q5MJ09 141 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms