RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 HDAC10Q969S8 669 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 NXNL1Q96CM4 212 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 VWCEQ96DN2 955 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 MTBPQ96DY7 904 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PAWRQ96IZ0 340 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 CLPTM1LQ96KA5 538 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 FCRL5Q96RD9 977 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 AAR2Q9Y312 384 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PCDHGC4Q9Y5F7 938 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 ATXN2Q99700 1313 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 INPPL1O15357 1258 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 MTSS1O43312 755 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 DNAJC8O75937 253 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SLC18A1P54219 525 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 BTG3Q14201 252 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 STXBP5Q5T5C0 1151 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 MBLAC2Q68D91 279 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 RGS9BPQ6ZS82 235 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 ANKS3Q6ZW76 656 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 LRRC43Q8N309 656 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 IGSF21Q96ID5 467 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 BPIFA1Q9NP55 256 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SIRPGQ9P1W8 387 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 PRUNE2Q8WUY3 3088 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 CEP290O15078 2479 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 F5H5T6 163 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 MMP2P08253 660 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 CPA3P15088 417 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 RHOQP17081 205 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 ATP5C1P36542 298 aaKnown RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 TAS2R39P59534 338 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 CSHL1Q14406 222 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF235Q14590 738 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 USP41Q3LFD5 358 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SIRPB2Q5JXA9 342 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 ZC3HC1Q86WB0 502 aaKnown RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SNX31Q8N9S9 440 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 TTC8Q8TAM2 541 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 SLC7A6OSQ96CW6 309 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 TBATAQ96M53 351 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 PRICKLE1Q96MT3 831 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 CWH43Q9H720 699 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 HBS1LQ9Y450 684 aaKnown RBP12.72□□□□□ -0.37
LIMK1-201ENST00000336180 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
LIMK1-201ENST00000336180 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TMEM233B4DJY2 109 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 GLRA3O75311 464 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 KRT34O76011 436 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 ANXA9O76027 345 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 PYGLP06737 847 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 RALBP11234 206 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 GKP32189 559 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 NPY2RP49146 381 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 GEMP55040 296 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 ZXDBP98169 803 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 OCRLQ01968 901 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 DLG1Q12959 904 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 FSCBQ5H9T9 825 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 PCID2Q5JVF3 399 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 PAF1Q8N7H5 531 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF781Q8N8C0 355 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 ARL14EPQ8N8R7 260 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 MIPEPQ99797 713 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TBC1D10AQ9BXI6 508 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 COPG2Q9UBF2 871 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TCAF1Q9Y4C2 921 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 FAM95CA0A1B0GW59 222 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 HDCP19113 662 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 NCF2P19878 526 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-201ENST00000336180 MPSTP25325 297 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 SLC8A1P32418 973 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 MAVSQ7Z434 540 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 CARNMT1Q8N4J0 409 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF483Q8TF39 744 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-201ENST00000336180 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 DNAJC1Q96KC8 554 aaKnown RBP12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 VAT1Q99536 393 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 WDR55Q9H6Y2 383 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-201ENST00000336180 NOD2Q9HC29 1040 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 PAK6Q9NQU5 681 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-201ENST00000336180 TLK1Q9UKI8 766 aa12.71□□□□□ -0.37
LIMK1-201ENST00000336180 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 PRR5-ARHGAP8B1AHC4 643 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 E9PBE3 544 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 KLHL41O60662 606 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 DCTN3O75935 186 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 ATP6V1G2O95670 118 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 PDHA1P08559 390 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 GSTA2P09210 222 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 HOXC13P31276 330 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms