RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PPP1R12CQ9BZL4 782 aa17.91■□□□□ 0.46
LRCH3-201ENST00000334859 UPF3AQ9H1J1 476 aaKnown RBP17.91■□□□□ 0.46
LRCH3-201ENST00000334859 TREX1Q9NSU2 369 aa17.91■□□□□ 0.46
LRCH3-201ENST00000334859 TBC1D13Q9NVG8 400 aa17.91■□□□□ 0.46
LRCH3-201ENST00000334859 OSER1Q9NX31 292 aa17.91■□□□□ 0.46
LRCH3-201ENST00000334859 SCOCQ9UIL1 159 aa17.91■□□□□ 0.46
LRCH3-201ENST00000334859 KCNU1A8MYU2 1149 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 AURKAO14965 403 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 GRID2O43424 1007 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 LINGO3P0C6S8 592 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 CD1EP15812 388 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 TYMPP19971 482 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 HK2P52789 917 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 DLG1Q12959 904 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 CDC16Q13042 620 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 LRRC36Q1X8D7 754 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 PIK3R6Q5UE93 754 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 KIAA0930Q6ICG6 404 aaPredicted RBP17.9■□□□□ 0.46
LRCH3-201ENST00000334859 NEPROQ6NW34 567 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 RANBP10Q6VN20 620 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 ZNF354CQ86Y25 554 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 CCDC117Q8IWD4 279 aaPredicted RBP17.9■□□□□ 0.46
LRCH3-201ENST00000334859 C2CD4AQ8NCU7 369 aaPredicted RBP17.9■□□□□ 0.46
LRCH3-201ENST00000334859 NDNQ99608 321 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 MRPL46Q9H2W6 279 aaKnown RBP17.9■□□□□ 0.46
LRCH3-201ENST00000334859 MRM3Q9HC36 420 aaKnown RBP17.9■□□□□ 0.46
LRCH3-201ENST00000334859 FBXO5Q9UKT4 447 aa17.9■□□□□ 0.46
LRCH3-201ENST00000334859 TARM1B6A8C7 271 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 JUNP05412 331 aaKnown RBP17.89■□□□□ 0.46
LRCH3-201ENST00000334859 THRAP10827 490 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 CPB1P15086 417 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 PPARGP37231 505 aaPredicted RBP17.89■□□□□ 0.46
LRCH3-201ENST00000334859 TRIM32Q13049 653 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 ARTNQ5T4W7 220 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 AFMIDQ63HM1 303 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 MARK4Q96L34 752 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 CATSPER2Q96P56 530 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 GPR78Q96P69 363 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 ARHGAP39Q9C0H5 1083 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 NT5MQ9NPB1 228 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 VTI1BQ9UEU0 232 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 PCDHB8Q9UN66 801 aa17.89■□□□□ 0.46
LRCH3-201ENST00000334859 TMEM233B4DJY2 109 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 B4GALT3O60512 393 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 POLD2P49005 469 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 MAXP61244 160 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.45
LRCH3-201ENST00000334859 KCNA10Q16322 511 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 DDR2Q16832 855 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 TMEM198Q66K66 360 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 LSMEM2Q8N112 164 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 HEXDCQ8WVB3 486 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 PABPC5Q96DU9 382 aaKnown RBP17.89■□□□□ 0.45
LRCH3-201ENST00000334859 CNDP1Q96KN2 507 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 POMKQ9H5K3 350 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
LRCH3-201ENST00000334859 PACSIN3Q9UKS6 424 aa17.89■□□□□ 0.45
LRCH3-201ENST00000334859 MIA3Q5JRA6 1907 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 SEPT4O43236 478 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 SP100P23497 879 aaPredicted RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 PAX3P23760 479 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 DNAJB1P25685 340 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 GPR15P49685 360 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 KPNA2P52292 529 aaKnown RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 MTTPP55157 894 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 RBM20Q5T481 1227 aaKnown RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 ZNF280DQ6N043 979 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 CNSTQ6PJW8 725 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 ADGRG6Q86SQ4 1221 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 TXNDC5Q8NBS9 432 aaKnown RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 KLHL5Q96PQ7 755 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 NOL6Q9H6R4 1146 aaKnown RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 GABRQQ9UN88 632 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 A0A087X1B8 175 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 HEATR9A2RTY3 570 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 SLCO1B7G3V0H7 640 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 UBTFL6P0CB48 400 aaPredicted RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 CD86P42081 329 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 MLLT6P55198 1093 aaPredicted RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 POU4F1Q01851 419 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 CSHL1Q14406 222 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 TSTD2Q5T7W7 516 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 GLB1LQ6UWU2 654 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 ZNF280BQ86YH2 543 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 RNF135Q8IUD6 432 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 LRRC49Q8IUZ0 686 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 HMCESQ96FZ2 354 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 MRPL57Q9BQC6 102 aaKnown RBP17.88■□□□□ 0.45
LRCH3-201ENST00000334859 YIPF3Q9GZM5 350 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 SLC25A51Q9H1U9 297 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 GTSE1Q9NYZ3 720 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 NCKIPSDQ9NZQ3 722 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 TLR6Q9Y2C9 796 aa17.88■□□□□ 0.45
LRCH3-201ENST00000334859 RGSL1A5PLK6 1076 aa17.87■□□□□ 0.45
LRCH3-201ENST00000334859 NEMP2A6NFY4 417 aa17.87■□□□□ 0.45
LRCH3-201ENST00000334859 BUD23O43709 281 aaKnown RBP17.87■□□□□ 0.45
LRCH3-201ENST00000334859 RAG1P15918 1043 aa17.87■□□□□ 0.45
LRCH3-201ENST00000334859 GRK4P32298 578 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms