RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CLCN3P51790 818 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 TMEM132DQ14C87 1099 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF829Q3KNS6 432 aaPredicted RBP13.88□□□□□ -0.19
SYNE3-201ENST00000334258 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 LBX2Q6XYB7 198 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 TMEM26Q6ZUK4 368 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 CLEC14AQ86T13 490 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 TP53INP2Q8IXH6 220 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 RSPH1Q8WYR4 309 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 SLC10A4Q96EP9 437 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 CYP4F12Q9HCS2 524 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 KIAA1257Q9ULG3 409 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
SYNE3-201ENST00000334258 UBDO15205 165 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 DLX3O60479 287 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 C8BP07358 591 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 PROZP22891 400 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 ATICP31939 592 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SLC7A2P52569 658 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 POU5F1BQ06416 359 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 DMPKQ09013 629 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TRAF2Q12933 501 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 MAPRE2Q15555 327 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TGFBIQ15582 683 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 PDCD4Q53EL6 469 aaKnown RBP13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TBCELQ5QJ74 424 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 ANKRD13AQ8IZ07 590 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SIX6OS1Q8N1H7 587 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 LZTR1Q8N653 840 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SLCO4A1Q96BD0 722 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TRNAU1APQ9NX07 287 aaKnown RBP13.87□□□□□ -0.19
SYNE3-201ENST00000334258 CACNA2D2Q9NY47 1150 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 ACOT9Q9Y305 439 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 KANSL1LA0AUZ9 987 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 FUOMA2VDF0 154 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 FBP2O00757 339 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 CAPNS1P04632 268 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 EEF1B2P24534 225 aaKnown RBP13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SOX11P35716 441 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 MAGEA12P43365 314 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TMED10P49755 219 aaKnown RBP13.87□□□□□ -0.19
SYNE3-201ENST00000334258 AMHR2Q16671 573 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 REP15Q6BDI9 236 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 RNF135Q8IUD6 432 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SLC41A1Q8IVJ1 513 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TNIP2Q8NFZ5 429 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 TCF12Q99081 682 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
SYNE3-201ENST00000334258 MINDY3Q9H8M7 445 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 SMOXQ9NWM0 555 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
SYNE3-201ENST00000334258 K7EPI3 171 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SRP72O76094 671 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 COL6A2P12110 1019 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 MAP4P27816 1152 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 RBP5P82980 135 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 CTBSQ01459 385 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SOWAHAQ2M3V2 549 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NHSL2Q5HYW2 709 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SAMD4BQ5PRF9 694 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 HMBOX1Q6NT76 420 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 CAMK1DQ8IU85 385 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 OFCC1Q8IZS5 231 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 TFAP2CQ92754 450 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ERLEC1Q96DZ1 483 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF385DQ9H6B1 395 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SLC38A7Q9NVC3 462 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 DUS2Q9NX74 493 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NCKIPSDQ9NZQ3 722 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 GMPR2Q9P2T1 348 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 GINS2Q9Y248 185 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ZCWPW2A0A1B0GU75 182 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SDHDO14521 159 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 CLOCKO15516 846 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 HK2P52789 917 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NME5P56597 212 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 PMS2P3Q13401 168 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SLC2A7Q6PXP3 512 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 CHST15Q7LFX5 561 aaPredicted RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 PSTKQ8IV42 348 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 LSMEM2Q8N112 164 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 KDM1BQ8NB78 822 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 RDH11Q8TC12 318 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NXNL1Q96CM4 212 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 CPB2Q96IY4 423 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ADI1Q9BV57 179 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 IL22Q9GZX6 179 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 DPP3Q9NY33 737 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 TMA7Q9Y2S6 64 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 C1orf232A0A0U1RR37 186 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NEMP2A6NFY4 417 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms