RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KIF20BQ96Q89 1820 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ASTN2O75129 1339 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 IMPA2O14732 288 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RECQL5O94762 991 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACADSBP45954 432 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CPA2P48052 419 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MCL1Q07820 350 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 HACD4Q5VWC8 232 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM160B2Q86V87 743 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 Q8N402 240 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RSPRY1Q96DX4 576 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 GRIP1Q9Y3R0 1128 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 POLR3AO14802 1390 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 NFKB1P19838 968 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 HNF4GQ14541 408 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTGISQ16647 500 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 WDR74Q6RFH5 385 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 C16orf86Q6ZW13 317 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MIGA2Q7L4E1 593 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARMC8Q8IUR7 673 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TSPAN14Q8NG11 270 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TAMM41Q96BW9 452 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CRELD1Q96HD1 420 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF395Q9H8N7 513 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 NMRK2Q9NPI5 230 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MKS1Q9NXB0 559 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 AHSPQ9NZD4 102 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB26Q9ULW5 256 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SSR3Q9UNL2 185 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANKARQ7Z5J8 1434 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCN3AQ9NY46 2000 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANGPTL7O43827 346 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALPPP05187 535 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CALCRP30988 508 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GGCXP38435 758 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FNTBP49356 437 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RGS1Q08116 209 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 C11orf63Q6NUN7 778 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 IDO2Q6ZQW0 420 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CACTIN-AS1Q8N1I8 211 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FBXW8Q8N3Y1 598 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADCY4Q8NFM4 1077 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCGB3A2Q96PL1 93 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRABDQ9H4I3 376 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GDPD2Q9HCC8 539 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SRPRBQ9Y5M8 271 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNK3O14649 394 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDH16O75309 829 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFNB1P01574 187 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 OPN1LWP04000 364 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 NAT2P11245 290 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM11P17152 192 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SERPINB5P36952 375 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CEBPDP49716 269 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 EIF6P56537 245 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RPL23AP62750 156 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF423Q2M1K9 1284 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GPATCH4Q5T3I0 446 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 IDNKQ5T6J7 187 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 STK32AQ8WU08 396 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CENPIQ92674 756 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 MYO9BQ13459 2157 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 MIA3Q5JRA6 1907 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAGEB4O15481 346 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 VSX2P58304 361 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TFDP2Q14188 446 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC5A9Q2M3M2 681 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TTC39BQ5VTQ0 682 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.11□□□□□ -1.433e-6■■■■■ 34.1
CDC42BPA-201ENST00000334218 SPATA22Q8NHS9 363 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTF2H4Q92759 462 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SNX27Q96L92 541 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 AIFM3Q96NN9 605 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TOR3AQ9H497 397 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM45AQ9NWC5 275 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 LRWD1Q9UFC0 647 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SPATA31A3Q5VYP0 1347 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 DIP2BQ9P265 1576 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 A8MU76 341 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 YY2O15391 372 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CNTFP26441 200 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CTHP32929 405 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CSTF2P33240 577 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PKNOX1P55347 436 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TYW3Q6IPR3 259 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TCTE3Q8IZS6 198 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SVBPQ8N300 66 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR5B12Q96R08 314 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCTD15Q96SI1 283 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACTR6Q9GZN1 396 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FN3KQ9H479 309 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADCY10Q96PN6 1610 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 KDM5CP41229 1560 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM240BA0A1B0GVZ2 78 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TGOLN2O43493 480 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRMUO75648 421 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms