RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 IMP4Q96G21 291 aaKnown RBP16.72■□□□□ 0.27
SHOX-201ENST00000334060 ZNF599Q96NL3 588 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 FAM129BQ96TA1 746 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
SHOX-201ENST00000334060 PRSS16Q9NQE7 514 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 WASF2Q9Y6W5 498 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 ANKRD36A6QL64 1941 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 KANSL1LA0AUZ9 987 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 AVILO75366 819 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 AGTP01019 485 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 ZNF33AQ06730 810 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 ENPP2Q13822 863 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 HNRNPA1L2Q32P51 320 aaKnown RBP16.71■□□□□ 0.27
SHOX-201ENST00000334060 AGGF1Q8N302 714 aaeCLIP16.71■□□□□ 0.27
SHOX-201ENST00000334060 OR2AP1Q8NGE2 309 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 MRGPRX2Q96LB1 330 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 MKRN2Q9H000 416 aaKnown RBP16.71■□□□□ 0.27
SHOX-201ENST00000334060 STK25O00506 426 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 PRLP01236 227 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 PIRTP0C851 137 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 DRD1P21728 446 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 TNFRSF4P43489 277 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 SULT2A1Q06520 285 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 GALNT3Q14435 633 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 DUPD1Q68J44 220 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 NCEH1Q6PIU2 408 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 KDELC1Q6UW63 502 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 ZNF534Q76KX8 674 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 IPMKQ8NFU5 416 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 FATE1Q969F0 183 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 EPB41L5Q9HCM4 733 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 CHKBQ9Y259 395 aa16.71■□□□□ 0.27
SHOX-201ENST00000334060 MYLKQ15746 1914 aa16.71■□□□□ 0.26
SHOX-201ENST00000334060 ZDBF2Q9HCK1 2354 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 CFAP69A5D8W1 941 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 BHMG1C9JSJ3 638 aaPredicted RBP16.7■□□□□ 0.26
SHOX-201ENST00000334060 OPHN1O60890 802 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 LEFTY1O75610 366 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 NEBLO76041 1014 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ASLP04424 464 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 SRPRAP08240 638 aaKnown RBP16.7■□□□□ 0.26
SHOX-201ENST00000334060 ECHS1P30084 290 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ADCY8P40145 1251 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 DHX34Q14147 1143 aaKnown RBP16.7■□□□□ 0.26
SHOX-201ENST00000334060 CARD16Q5EG05 197 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ARSIQ5FYB1 569 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 KCTD11Q693B1 232 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ALG1LQ6GMV1 187 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ZDHHC24Q6UX98 284 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ZNF557Q8N988 423 aaPredicted RBP16.7■□□□□ 0.26
SHOX-201ENST00000334060 PDCD6IPQ8WUM4 868 aaKnown RBP16.7■□□□□ 0.26
SHOX-201ENST00000334060 NSMCE1Q8WV22 266 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 TADA1Q96BN2 335 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 ERP44Q9BS26 406 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 POLR1EQ9GZS1 481 aaKnown RBP16.7■□□□□ 0.26
SHOX-201ENST00000334060 SCUBE2Q9NQ36 999 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 SERGEFQ9UGK8 458 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 CKAP5Q14008 2032 aa16.7■□□□□ 0.26
SHOX-201ENST00000334060 GAS8O95995 478 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 UGT2B4P06133 528 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 APRTP07741 180 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 SLC8A1P32418 973 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 PXNP49023 591 aaPredicted RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 CARSP49589 748 aaKnown RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 COPAP53621 1224 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 ITGA8P53708 1063 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 ST8SIA6P61647 398 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 PRKCQQ04759 706 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 KCNJ11Q14654 390 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 MYLK3Q32MK0 819 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 RNASEH2BQ5TBB1 312 aaKnown RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 IZUMO3Q5VZ72 239 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 SRLQ86TD4 932 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 MMAAQ8IVH4 418 aaKnown RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 UBALD2Q8IYN6 164 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 FCRL5Q96RD9 977 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 SLC25A51Q9H1U9 297 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 FARP1Q9Y4F1 1045 aaPredicted RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 A8MX80 341 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 TRAFD1O14545 582 aaPredicted RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 TPH1P17752 444 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 CRADDP78560 199 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 RFTN1Q14699 578 aaPredicted RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 HP1BP3Q5SSJ5 553 aaPredicted RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 DENND2CQ68D51 928 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 SLC25A41Q8N5S1 370 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 PJA1Q8NG27 643 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 WDR83Q9BRX9 315 aaKnown RBP16.69■□□□□ 0.26
SHOX-201ENST00000334060 FICDQ9BVA6 458 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 YY1AP1Q9H869 796 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 PAK5Q9P286 719 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 GGT7Q9UJ14 662 aa16.69■□□□□ 0.26
SHOX-201ENST00000334060 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 SEC31AO94979 1220 aaKnown RBP16.68■□□□□ 0.26
SHOX-201ENST00000334060 HOXB2P14652 356 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 NTSR1P30989 418 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 WNT3AP56704 352 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms