RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 MFSD6LQ8IWD5 586 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 LRRC39Q96DD0 335 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 EBNA1BP2Q99848 306 aaKnown RBP23.55■■□□□ 1.36
TSEN54-201ENST00000333213 VPS45Q9NRW7 570 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 FAM169AQ9Y6X4 670 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 SDR42E2A6NKP2 422 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 H3BQ06 376 aaPredicted RBP23.55■■□□□ 1.36
TSEN54-201ENST00000333213 ZNF821O75541 412 aaPredicted RBP23.55■■□□□ 1.36
TSEN54-201ENST00000333213 ABHD2P08910 425 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 CISD3P0C7P0 127 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 NR1D1P20393 614 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 STK19P49842 368 aaPredicted RBP23.55■■□□□ 1.36
TSEN54-201ENST00000333213 SCNN1BP51168 640 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 GEN1Q17RS7 908 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 RETSATQ6NUM9 610 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 PALM2Q8IXS6 379 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 BBS5Q8N3I7 341 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 DNAAF3Q8N9W5 541 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 SUSD6Q92537 303 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 PPP1R2P1Q96PQ5 205 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 ECT2Q9H8V3 914 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 VPS37BQ9H9H4 285 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 MAD1L1Q9Y6D9 718 aa23.55■■□□□ 1.36
TSEN54-201ENST00000333213 PIAS1O75925 651 aa23.54■■□□□ 1.36
TSEN54-201ENST00000333213 ETFBKMTQ8IXQ9 262 aa23.54■■□□□ 1.36
TSEN54-201ENST00000333213 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.54■■□□□ 1.36
TSEN54-201ENST00000333213 ATP11CQ8NB49 1132 aa23.54■■□□□ 1.36
TSEN54-201ENST00000333213 FSD1LQ9BXM9 530 aa23.54■■□□□ 1.36
TSEN54-201ENST00000333213 EPN3Q9H201 632 aa23.54■■□□□ 1.36
TSEN54-201ENST00000333213 TMBIM4Q9HC24 238 aa23.54■■□□□ 1.36
TSEN54-201ENST00000333213 ZC3H7BQ9UGR2 993 aaKnown RBP23.54■■□□□ 1.36
TSEN54-201ENST00000333213 USP15Q9Y4E8 981 aaPredicted RBP23.54■■□□□ 1.36
TSEN54-201ENST00000333213 COL4A3Q01955 1670 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 GOLGA6L10A6NI86 522 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 ADH1CP00326 375 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 SP100P23497 879 aaPredicted RBP23.53■■□□□ 1.36
TSEN54-201ENST00000333213 CDH17Q12864 832 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 UNC5AQ6ZN44 842 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 LINC00523Q86TU6 105 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 ATP2A3Q93084 1043 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 CFAP36Q96G28 342 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 SLC2A11Q9BYW1 496 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 INSIG1O15503 277 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 NFATC1O95644 943 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 C1QAP02745 245 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 YTHDF3Q7Z739 585 aaKnown RBP23.53■■□□□ 1.36
TSEN54-201ENST00000333213 EPS8L3Q8TE67 593 aaKnown RBP23.53■■□□□ 1.36
TSEN54-201ENST00000333213 ELSPBP1Q96BH3 223 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 RABGEF1Q9UJ41 708 aa23.53■■□□□ 1.36
TSEN54-201ENST00000333213 LOC285095A0A1B0GVY8 99 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 TCRBV9S1A1TA0A576 114 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 TULP3O75386 442 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 SRCP12931 536 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 LSP1P33241 339 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 SLC6A11P48066 632 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 EIF3BP55884 814 aaKnown RBP23.52■■□□□ 1.36
TSEN54-201ENST00000333213 NSUN2Q08J23 767 aaKnown RBP eCLIP23.52■■□□□ 1.36
TSEN54-201ENST00000333213 IFFO1Q0D2I5 559 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 MSLNQ13421 630 aaPredicted RBP23.52■■□□□ 1.36
TSEN54-201ENST00000333213 LONRF1Q17RB8 773 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 DGKKQ5KSL6 1271 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 ATXN7L2Q5T6C5 722 aaPredicted RBP23.52■■□□□ 1.36
TSEN54-201ENST00000333213 MICALCLQ6ZW33 695 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 STAMBPL1Q96FJ0 436 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 NUDCD1Q96RS6 583 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 GAS2L1Q99501 681 aaPredicted RBP23.52■■□□□ 1.36
TSEN54-201ENST00000333213 TM6SF2Q9BZW4 377 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 ARNT2Q9HBZ2 717 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 THG1LQ9NWX6 298 aaKnown RBP23.52■■□□□ 1.36
TSEN54-201ENST00000333213 GTSE1Q9NYZ3 720 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 HS3ST2Q9Y278 367 aa23.52■■□□□ 1.36
TSEN54-201ENST00000333213 NDUFAB1O14561 156 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 ATP9BO43861 1147 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 SERPINF2P08697 491 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 ATXN1LP0C7T5 689 aaKnown RBP23.51■■□□□ 1.35
TSEN54-201ENST00000333213 PSMC3P17980 439 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 PDGFRLQ15198 375 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 NAIF1Q69YI7 327 aaPredicted RBP23.51■■□□□ 1.35
TSEN54-201ENST00000333213 CASC4Q6P4E1 433 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 ZNF557Q8N988 423 aaPredicted RBP23.51■■□□□ 1.35
TSEN54-201ENST00000333213 FBF1Q8TES7 1133 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 E2F7Q96AV8 911 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 VOPP1Q96AW1 172 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 CHFRQ96EP1 664 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 CD207Q9UJ71 328 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 GRXCR2A6NFK2 248 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 GCAP28676 217 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 MDH1P40925 334 aaKnown RBP23.51■■□□□ 1.35
TSEN54-201ENST00000333213 SLCO1A2P46721 670 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 DGKGP49619 791 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 RHOAP61586 193 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 EFTUD2Q15029 972 aaKnown RBP eCLIP23.51■■□□□ 1.359e-7■■■■■ 42
TSEN54-201ENST00000333213 SLC1A5Q15758 541 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 SLC25A41Q8N5S1 370 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 TTC8Q8TAM2 541 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 SORCS1Q8WY21 1168 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 XPO6Q96QU8 1125 aaKnown RBP23.51■■□□□ 1.35
TSEN54-201ENST00000333213 TRIB3Q96RU7 358 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 TMEM109Q9BVC6 243 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 SCUBE2Q9NQ36 999 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms