RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MFSD6LQ8IWD5 586 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 CENPLQ8N0S6 344 aaPredicted RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 TMEM151AQ8N4L1 468 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 ZNF781Q8N8C0 355 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 C2CD4AQ8NCU7 369 aaPredicted RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 RBM15BQ8NDT2 890 aaKnown RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 FBXO27Q8NI29 283 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 KCTD4Q8WVF5 259 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 RPRD1AQ96P16 312 aaPredicted RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 VPS45Q9NRW7 570 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 CDY1Q9Y6F8 540 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 HEATR9A2RTY3 570 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 DRGXA6NNA5 263 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 RAB10P61026 200 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 DSC2Q02487 901 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 DUSP4Q13115 394 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 BLMHQ13867 455 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 VWA5B1Q5TIE3 1220 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 ZYG11AQ6WRX3 759 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 CIR1Q86X95 450 aaPredicted RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 CEP97Q8IW35 865 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 TEX26Q8N6G2 289 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 ENDOVQ8N8Q3 282 aaKnown RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 ANKRD27Q96NW4 1050 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 FAM167BQ9BTA0 163 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 GATA5Q9BWX5 397 aaPredicted RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 CCSER2Q9H7U1 834 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 RUVBL2Q9Y230 463 aaKnown RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 ACOT9Q9Y305 439 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 RAMP2O60895 175 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 MMP2P08253 660 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 SBK3P0C264 359 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 TPBGLP0DKB5 382 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 COL6A2P12110 1019 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 STMN1P16949 149 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 PGM1P36871 562 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 GLRBP48167 497 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 CD151P48509 253 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 SERPINH1P50454 418 aaKnown RBP17.58■□□□□ 0.4
DDX28-201ENST00000332395 RING1Q06587 406 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 ELAVL2Q12926 359 aaKnown RBP17.58■□□□□ 0.4
DDX28-201ENST00000332395 USP4Q13107 963 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 ZNF460Q14592 562 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 POLD3Q15054 466 aaPredicted RBP17.58■□□□□ 0.4
DDX28-201ENST00000332395 DEFB115Q30KQ5 88 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 FAM126BQ8IXS8 530 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 ARHGAP24Q8N264 748 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 CDH19Q9H159 772 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 GPBP1L1Q9HC44 474 aaPredicted RBP17.58■□□□□ 0.4
DDX28-201ENST00000332395 FBXO5Q9UKT4 447 aa17.58■□□□□ 0.4
DDX28-201ENST00000332395 H7C4K7 107 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 TLR5O60602 858 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 KLHL2O95198 593 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 GALTP07902 379 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 MYL4P12829 197 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 DNAJB1P25685 340 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 SMARCB1Q12824 385 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 IHHQ14623 411 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 LIPMQ5VYY2 423 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 ARMC3Q5W041 872 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 NEPROQ6NW34 567 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 NPAS4Q8IUM7 802 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 ZNF483Q8TF39 744 aaPredicted RBP17.57■□□□□ 0.4
DDX28-201ENST00000332395 GIPC2Q8TF65 315 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 SEPT8Q92599 483 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 SCYL1Q96KG9 808 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 RANBP9Q96S59 729 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 COMMD8Q9NX08 183 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 LUC7L3O95232 432 aaKnown RBP17.57■□□□□ 0.4
DDX28-201ENST00000332395 GNRH1P01148 92 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 ZDHHC11BP0C7U3 371 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 CDC25CP30307 473 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 TNK2Q07912 1038 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 IL10RBQ08334 325 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 TCTN1Q2MV58 587 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 PARP15Q460N3 678 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 KHDC1Q4VXA5 237 aaKnown RBP17.57■□□□□ 0.4
DDX28-201ENST00000332395 ACBD5Q5T8D3 534 aaPredicted RBP17.57■□□□□ 0.4
DDX28-201ENST00000332395 SNX30Q5VWJ9 437 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 LRRC8EQ6NSJ5 796 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 ANKS3Q6ZW76 656 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 TAS1R1Q7RTX1 841 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 FSTL5Q8N475 847 aaPredicted RBP17.57■□□□□ 0.4
DDX28-201ENST00000332395 MICAL1Q8TDZ2 1067 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 STYXQ8WUJ0 223 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 ELMO2Q96JJ3 720 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 COG4Q9H9E3 785 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 TET1Q8NFU7 2136 aa17.57■□□□□ 0.4
DDX28-201ENST00000332395 TTC24A2A3L6 582 aaPredicted RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 H0Y3Z8 333 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 MAGEC1O60732 1142 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 LMNAP02545 664 aaKnown RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 GNAZP19086 355 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 CRABP2P29373 138 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 OR1E1P30953 314 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 MSLNQ13421 630 aaPredicted RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 SERINC3Q13530 473 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 KPNB1Q14974 876 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms