RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 TEAD4Q15561 434 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 RSPO4Q2I0M5 234 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 MARC1Q5VT66 337 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 NCBP2-AS2Q69YL0 99 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 TIGD7Q6NT04 549 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 SRLQ86TD4 932 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 TTC7BQ86TV6 843 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 ZCCHC9Q8N567 271 aaKnown RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 TSEN2Q8NCE0 465 aaKnown RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 CCDC112Q8NEF3 446 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 KIAA1524Q8TCG1 905 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 HCAR2Q8TDS4 363 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 SKA1Q96BD8 255 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 FEM1CQ96JP0 617 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 ZNF641Q96N77 438 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 ZNF830Q96NB3 372 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 KLHL32Q96NJ5 620 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 PSKH2Q96QS6 385 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 TUBGCP5Q96RT8 1024 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 ZDHHC5Q9C0B5 715 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 LACRTQ9GZZ8 138 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 CAPN10Q9HC96 672 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 HAUS2Q9NVX0 235 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 SALL4Q9UJQ4 1053 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 LAMA1P25391 3075 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 CACNA1EQ15878 2313 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 TRPM6Q9BX84 2022 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 LNP1A1A4G5 178 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 C3orf70A6NLC5 250 aaPredicted RBP14.19□□□□□ -0.14
LIMS1-201ENST00000332345 RNF103O00237 685 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 ARHGAP33O14559 1287 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 AP1G1O43747 822 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 NRDCO43847 1150 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 PCDH8O95206 1070 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 ZRANB2O95218 330 aaKnown RBP eCLIP14.19□□□□□ -0.14
LIMS1-201ENST00000332345 ENGP17813 658 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 CCNCP24863 283 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 HSPA9P38646 679 aaKnown RBP14.19□□□□□ -0.14
LIMS1-201ENST00000332345 GARSP41250 739 aaKnown RBP14.19□□□□□ -0.14
LIMS1-201ENST00000332345 MAPK8P45983 427 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 TAS2R38P59533 333 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 RACK1P63244 317 aaKnown RBP14.19□□□□□ -0.14
LIMS1-201ENST00000332345 SLC10A7Q0GE19 358 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 GALNT2Q10471 571 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 ZNF235Q14590 738 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 STPG1Q5TH74 334 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 TRIM69Q86WT6 500 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 RCOR2Q8IZ40 523 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 PQLC3Q8N755 202 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 C1orf216Q8TAB5 229 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 EXOC2Q96KP1 924 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 TSGA13Q96PP4 275 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 EDEM2Q9BV94 578 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 SUV39H2Q9H5I1 410 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 ATP13A3Q9H7F0 1226 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 TMEM9BQ9NQ34 198 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 DKK3Q9UBP4 350 aa14.19□□□□□ -0.14
LIMS1-201ENST00000332345 DOCK9Q9BZ29 2069 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 ADAMTS9Q9P2N4 1935 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 C10orf142B7Z368 130 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 NEMP1O14524 444 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 APOL1O14791 398 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 MATN3O15232 486 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 INSIG1O15503 277 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 ARHGAP6O43182 974 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 LATO43561 262 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 TSPAN6O43657 245 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 MFSD11O43934 449 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 RNGTTO60942 597 aaKnown RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 PEX11BO96011 259 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 XPAP23025 273 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 ID4P47928 161 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 SCNN1BP51168 640 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 SUOXP51687 545 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 BCL2L1Q07817 233 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 HNRNPDQ14103 355 aaKnown RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 TFDP2Q14188 446 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 PUM1Q14671 1186 aaKnown RBP eCLIP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 SETMARQ53H47 684 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 CFAP58Q5T655 872 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 IL27RAQ6UWB1 636 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 BZW1Q7L1Q6 419 aaKnown RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 PARS2Q7L3T8 475 aaKnown RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 ADAT2Q7Z6V5 191 aaKnown RBP14.18□□□□□ -0.14
LIMS1-201ENST00000332345 ZSCAN30Q86W11 494 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 HORMAD1Q86X24 394 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 RFX6Q8HWS3 928 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 KATNAL2Q8IYT4 538 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 CCNYQ8ND76 341 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 FATE1Q969F0 183 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 SERAC1Q96JX3 654 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 GOLPH3Q9H4A6 298 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 TM9SF3Q9HD45 589 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 RXFP3Q9NSD7 469 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 DMTF1Q9Y222 760 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 HEY1Q9Y5J3 304 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 FADS3Q9Y5Q0 445 aa14.18□□□□□ -0.14
LIMS1-201ENST00000332345 KNL1Q8NG31 2342 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms