RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PBX3P40426 434 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 CD151P48509 253 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 NDST2P52849 883 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 COPAP53621 1224 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 ARL13AQ5H913 290 aaPredicted RBP15.02■□□□□ -0
CLCNKA-201ENST00000331433 RALGPS1Q5JS13 557 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 RBM20Q5T481 1227 aaKnown RBP15.02■□□□□ -0
CLCNKA-201ENST00000331433 MARC1Q5VT66 337 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 TRIM68Q6AZZ1 485 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 KIAA0930Q6ICG6 404 aaPredicted RBP15.02■□□□□ -0
CLCNKA-201ENST00000331433 NEPROQ6NW34 567 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 CNSTQ6PJW8 725 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 RSPO2Q6UXX9 243 aaPredicted RBP15.02■□□□□ -0
CLCNKA-201ENST00000331433 ARHGAP18Q8N392 663 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 STYXQ8WUJ0 223 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 NRG4Q8WWG1 115 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 NAF1Q96HR8 494 aaKnown RBP15.02■□□□□ -0
CLCNKA-201ENST00000331433 GPR78Q96P69 363 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 PPP1R2P1Q96PQ5 205 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 NDNQ99608 321 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 OMDQ99983 421 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 ILKAPQ9H0C8 392 aaPredicted RBP15.02■□□□□ -0
CLCNKA-201ENST00000331433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.02■□□□□ -0
CLCNKA-201ENST00000331433 MARCH2Q9P0N8 246 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 STOML1Q9UBI4 398 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 MID2Q9UJV3 735 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 LRRC42Q9Y546 428 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 A0A1W2PQ45 241 aaPredicted RBP15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 A0A1W2PQY0 241 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 TARM1B6A8C7 271 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 CCL22O00626 93 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 NEMP1O14524 444 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 DLX3O60479 287 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 H2AFYO75367 372 aaKnown RBP15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 GJB3O75712 270 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 ZMPSTE24O75844 475 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 PIGNO95427 931 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 MMP2P08253 660 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 MYL4P12829 197 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 ETFBP38117 255 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 MAGEA11P43364 429 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 MGAT5BQ3V5L5 792 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 ABI1Q8IZP0 508 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 RDH11Q8TC12 318 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 SGF29Q96ES7 293 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 MYEOVQ96EZ4 313 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 BTN2A3PQ96KV6 586 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 OSBPL1AQ9BXW6 950 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 WDR55Q9H6Y2 383 aaPredicted RBP15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 SRRDQ9UH36 339 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 WASF2Q9Y6W5 498 aa15.02□□□□□ -0.01
CLCNKA-201ENST00000331433 A0A088AWK7 358 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 SLC12A8A0AV02 714 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 NT5C1B-RDH14C9J2C7 533 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 CIB2O75838 187 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 CD1EP15812 388 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 SNX30Q5VWJ9 437 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 NET1Q7Z628 596 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 ATP6V0D2Q8N8Y2 350 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 CFAP61Q8NHU2 1237 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 DRC3Q9H069 523 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 STARD7Q9NQZ5 370 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 TMEM161AQ9NX61 479 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 IL37Q9NZH6 218 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 FNIP2Q9P278 1114 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 MOXD2PA6NHM9 499 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 SERPINH1P50454 418 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 MRPL58Q14197 206 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 NAA25Q14CX7 972 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 TRIP4Q15650 581 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 C1orf146Q5VVC0 180 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 RNF19BQ6ZMZ0 732 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 TMC7Q7Z402 723 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 TET1Q8NFU7 2136 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 CD99L2Q8TCZ2 262 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 RPRD1AQ96P16 312 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 FAM167BQ9BTA0 163 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 PRKD2Q9BZL6 878 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 CCSER2Q9H7U1 834 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 CYP4F11Q9HBI6 524 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 ATP13A1Q9HD20 1204 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 TCF7L2Q9NQB0 619 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 NMRK1Q9NWW6 199 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 ZDHHC2Q9UIJ5 367 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 RAP2CQ9Y3L5 183 aa15.01□□□□□ -0.01
CLCNKA-201ENST00000331433 IGLV3-10A0A075B6K4 115 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 FAM92AA1XBS5 289 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 HEATR9A2RTY3 570 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 MTMR11A4FU01 709 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 MATN2O00339 956 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 SORBS2O94875 1100 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 VNN2O95498 520 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 EPHA3P29320 983 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 SLC34A1Q06495 639 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 TRMT5Q32P41 509 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 TSTD2Q5T7W7 516 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 FRMD7Q6ZUT3 714 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 DBF4BQ8NFT6 615 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 OR13J1Q8NGT2 312 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms