RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RGRP47804 291 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 CSRP3P50461 194 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 DLG2Q15700 870 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 FSCBQ5H9T9 825 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 ARMC3Q5W041 872 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 KIAA0930Q6ICG6 404 aaPredicted RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 ZC3HC1Q86WB0 502 aaKnown RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 DENND6AQ8IWF6 608 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 KREMEN2Q8NCW0 462 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 VPS39Q96JC1 886 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 PSKH2Q96QS6 385 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 MGME1Q9BQP7 344 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 PRKD2Q9BZL6 878 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 NSMCE4AQ9NXX6 385 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 UBA2Q9UBT2 640 aaPredicted RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 SEPT3Q9UH03 358 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 HEATR9A2RTY3 570 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 BIRC5O15392 142 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 TIMM44O43615 452 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 PLIN3O60664 434 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 GLRA3O75311 464 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 SERPINB8P50452 374 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 CDK18Q07002 472 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 CTBP1Q13363 440 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 GRM3Q14832 879 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 INSCQ1MX18 579 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 NUDCD3Q8IVD9 361 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 PLD6Q8N2A8 252 aaKnown RBP17.13■□□□□ 0.33
DDX41-201ENST00000330503 FEM1CQ96JP0 617 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 RAD9AQ99638 391 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 TSSK1BQ9BXA7 367 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 ZNF358Q9NW07 568 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 TMEM216Q9P0N5 145 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 KLHL14Q9P2G3 628 aa17.13■□□□□ 0.33
DDX41-201ENST00000330503 MROH6A6NGR9 719 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 HIDE1A8MVS5 230 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 TBL1XO60907 577 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 CD160O95971 181 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 C8AP07357 584 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 NEFHP12036 1026 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 DNAJB1P25685 340 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 IRX4P78413 519 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 MPP1Q00013 466 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 OVGP1Q12889 678 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 MAB21L3Q8N8X9 362 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 C10orf82Q8WW14 230 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 GPR22Q99680 433 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 PLCD4Q9BRC7 762 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 RHOJQ9H4E5 214 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 DENND4CQ5VZ89 1909 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 ALPK3Q96L96 1907 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 PAPSS2O95340 614 aaPredicted RBP17.12■□□□□ 0.33
DDX41-201ENST00000330503 IL1BP01584 269 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 EPOP01588 193 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 LRG1P02750 347 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 PROCP04070 461 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 MPOP05164 745 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 CR2P20023 1033 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 BMPR1AP36894 532 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 CLEC14AQ86T13 490 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 FAM217AQ8IXS0 508 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 FITM2Q8N6M3 262 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 OR13J1Q8NGT2 312 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 SLC22A17Q8WUG5 538 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 MRPS31Q92665 395 aaKnown RBP17.12■□□□□ 0.33
DDX41-201ENST00000330503 E2F7Q96AV8 911 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 TRIB3Q96RU7 358 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 TCF25Q9BQ70 676 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 KCTD3Q9Y597 815 aa17.12■□□□□ 0.33
DDX41-201ENST00000330503 CBX4O00257 560 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 C2P06681 752 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 ADH1AP07327 375 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 GJA1P17302 382 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 MZF1P28698 734 aaPredicted RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 LIG3P49916 1009 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 ARF5P84085 180 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 BST1Q10588 318 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 GALNTL6Q49A17 601 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 NEPROQ6NW34 567 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 MFSD6LQ8IWD5 586 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 TRIM42Q8IWZ5 723 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 CARNMT1Q8N4J0 409 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 C2CD4AQ8NCU7 369 aaPredicted RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 RFWD2Q8NHY2 731 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 TMA16Q96EY4 203 aaKnown RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 CINPQ9BW66 212 aaPredicted RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 MUC3BQ9H195 1237 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 ZNF395Q9H8N7 513 aaPredicted RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 HAUS2Q9NVX0 235 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 SLC39A10Q9ULF5 831 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms