RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 OR2B6P58173 313 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PCSK7Q16549 785 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SPATS1Q496A3 300 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 DNAAF5Q86Y56 855 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TNS4Q8IZW8 715 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 OR8H1Q8NGG4 311 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 KBTBD7Q8WVZ9 684 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 NXNL1Q96CM4 212 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 HPDLQ96IR7 371 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TBCBQ99426 244 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MAN1C1Q9NR34 630 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TAS2R14Q9NYV8 317 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MTRRQ9UBK8 725 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 FBXO40Q9UH90 709 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 INVSQ9Y283 1065 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CASP8AP2Q9UKL3 1982 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 FER1L5A0AVI2 2057 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PLXNB1O43157 2135 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TCRBV5S4A2TA0A5A2 114 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LSM3P62310 102 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 INSCQ1MX18 579 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PKN3Q6P5Z2 889 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SLC35C1Q96A29 364 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ASB9Q96DX5 294 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LOC102724428A0A0B4J2F2 783 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ERI2A8K979 691 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ORC5O43913 435 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 STX11O75558 287 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 FADS2O95864 444 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SIK1P57059 783 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 GJA9P57773 515 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 RBP5P82980 135 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CDK18Q07002 472 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 IL17AQ16552 155 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LDLRAP1Q5SW96 308 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SLC44A2Q8IWA5 706 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CBR4Q8N4T8 237 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TDRD1Q9BXT4 1180 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ANKEF1Q9NU02 776 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MAGEL2Q9UJ55 1249 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 NOL4O94818 638 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 GUCA1CO95843 209 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 NTRK1P04629 796 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ERVK-10P10266 1014 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 DBTP11182 482 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 AOC1P19801 751 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 EPHA3P29320 983 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 GTF2H3Q13889 308 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SLC1A5Q15758 541 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 VPS72Q15906 364 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PAGE2BQ5JRK9 111 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CAMKK1Q8N5S9 505 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 EFHBQ8N7U6 833 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TRPV1Q8NER1 839 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 NGLY1Q96IV0 654 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MID1IP1Q9NPA3 183 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ARHGEF33A8MVX0 844 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 H0YGN5 161 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ALOX15BO15296 676 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PIGNO95427 931 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CST1P01037 141 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 UGT2B4P06133 528 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CSNK2BP67870 215 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LCN1P1Q5VSP4 162 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SVOPLQ8N434 492 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ORAI2Q96SN7 254 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CBWD1Q9BRT8 395 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LATS2Q9NRM7 1088 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 NFS1Q9Y697 457 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 BTAF1O14981 1849 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PHIPQ8WWQ0 1821 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 TICRRQ7Z2Z1 1910 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ASNSP08243 561 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CNPP09543 421 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SLC7A1P30825 629 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 HPCAL1P37235 193 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 HNRNPFP52597 415 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 THOP1P52888 689 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TMBIM6P55061 237 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PGS1Q32NB8 556 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 KDELC2Q7Z4H8 507 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 FAM120BQ96EK7 910 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SH3BP4Q9P0V3 963 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PTPRFP10586 1907 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 EFCAB9A8MZ26 197 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ENDOUP21128 410 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 GPD2P43304 727 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 DNASE1L3Q13609 305 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CBWD6Q4V339 395 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CBWD3Q5JTY5 395 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CBWD5Q5RIA9 395 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 MFSD7Q6UXD7 560 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SDR16C5Q8N3Y7 309 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 BANPQ8N9N5 519 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 HTR3CQ8WXA8 447 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 NODALQ96S42 347 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 YTHDF1Q9BYJ9 559 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 IFT80Q9P2H3 777 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SSR3Q9UNL2 185 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms