RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TSC22D4Q9Y3Q8 395 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 ATG7O95352 703 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 RAD51Q06609 339 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 BFSP2Q13515 415 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 TARBP2Q15633 366 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 ATP6AP1LQ52LC2 224 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 POTEHQ6S545 545 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 MARVELD2Q8N4S9 558 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 OR2T34Q8NGX1 318 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 OR2T3Q8NH03 318 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 LPIN3Q9BQK8 851 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 HMBSP08397 361 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 CDH13P55290 713 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 ZNF460Q14592 562 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 MARC1Q5VT66 337 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 GPRC5AQ8NFJ5 357 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 DNAJB14Q8TBM8 379 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 PLEKHG4BQ96PX9 1271 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 ASB2Q96Q27 587 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 SYTL2Q9HCH5 934 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 KIF17Q9P2E2 1029 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 MFHAS1Q9Y4C4 1052 aa12.86□□□□□ -0.35
DNMT3A-202ENST00000321117 MATN2O00339 956 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 BNIP2Q12982 314 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 OLIG2Q13516 323 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ANKS6Q68DC2 871 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 OTOP3Q7RTS5 596 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ANKRD13AQ8IZ07 590 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CBR4Q8N4T8 237 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 PTGR2Q8N8N7 351 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 RTP4Q96DX8 246 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 COPG1Q9Y678 874 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 SNAP91O60641 907 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 B3GAT3O94766 335 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 IPO13O94829 963 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 GMPRP36959 345 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 RENBPP51606 427 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 PAN2Q504Q3 1202 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ARHGAP17Q68EM7 881 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 REP15Q6BDI9 236 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CYS1Q717R9 158 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 SLC35F5Q8WV83 523 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 GMLQ99445 158 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ASPSCR1Q9BZE9 553 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 PDGFCQ9NRA1 345 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 VPS45Q9NRW7 570 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 TTC36A6NLP5 189 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ZBTB14O43829 449 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CKMT2P17540 419 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 SERPINH1P50454 418 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 SCNN1BP51168 640 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 FAM98BQ52LJ0 330 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CCDC81Q6ZN84 652 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ASB9Q96DX5 294 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 MAGED4Q96JG8 741 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 MTG1Q9BT17 334 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 TRMOQ9BU70 441 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 MAF1Q9H063 256 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 DERAQ9Y315 318 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 DNAJA2O60884 412 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 BCAS2O75934 225 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 STBD1O95210 358 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 HGFP14210 728 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CHRM3P20309 590 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 HPCAP84074 193 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 INCA1Q0VD86 236 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 VGLL4Q14135 290 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ZIK1Q3SY52 487 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 TREML2Q5T2D2 321 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 DENND6AQ8IWF6 608 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 CLYBLQ8N0X4 340 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 KLRG1Q96E93 195 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 NXF3Q9H4D5 531 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
DNMT3A-202ENST00000321117 MYOCOSA0A1B0GUC4 107 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 FAM149AA5PLN7 773 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 CTSHP09668 335 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 NUMBP49757 651 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 TAS2R39P59534 338 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 GHRHRQ02643 423 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SLC10A2Q12908 348 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms