RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PHGDHO43175 533 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 FOXD2O60548 495 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF189O75820 626 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 HMBSP08397 361 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 TFPTP0C1Z6 253 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 GARSP41250 739 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 NIPAL4Q0D2K0 466 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 SLC39A12Q504Y0 691 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 RGMBQ6NW40 437 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 SAPCD2Q86UD0 394 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 TMEM86AQ8N2M4 240 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 SORT1Q99523 831 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF195O14628 629 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 THRAP10827 490 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF460Q14592 562 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 BTBD8Q5XKL5 378 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 FSTL4Q6MZW2 842 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 BHLHA9Q7RTU4 235 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SERINC5Q86VE9 423 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 TICAM1Q8IUC6 712 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SUDS3Q9H7L9 328 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 RAB26Q9ULW5 256 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 ARHGAP10A1A4S6 786 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 GRK4P32298 578 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 ENTPD1P49961 510 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 CAP1Q01518 475 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SEPT6Q14141 434 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 CYTH1Q15438 398 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 MFSD14CQ5VZR4 134 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 RNF148Q8N7C7 305 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 CNTD1Q8N815 330 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SLC35B4Q969S0 331 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 RIMS3Q9UJD0 308 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 E9PBE3 544 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 AP2A1O95782 977 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 FAM58BPP0C7Q3 252 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 COX4I1P13073 169 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 CCR10P46092 362 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 OR1G1P47890 313 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SLC5A3P53794 718 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 ITKQ08881 620 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 INTS6LQ5JSJ4 861 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SPATA2LQ8IUW3 424 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 BBS5Q8N3I7 341 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 CASP10Q92851 521 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF419Q96HQ0 510 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 LRRC40Q9H9A6 602 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 FAIMQ9NVQ4 179 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 PLK2Q9NYY3 685 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 SSX2IPQ9Y2D8 614 aa15.73■□□□□ 0.11
SHROOM1-201ENST00000319854 BIRC5O15392 142 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 PLIN3O60664 434 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 PAGE1O75459 146 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 ATP5BP06576 529 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 GP5P40197 560 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 CHRNA4P43681 627 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 CCR3P51677 355 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 NR1H2P55055 460 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 CTBP1Q13363 440 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 SLC44A4Q53GD3 710 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 SMYD1Q8NB12 490 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 PPP4R1Q8TF05 950 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 PKP2Q99959 881 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 C6orf203Q9P0P8 240 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 GIT1Q9Y2X7 761 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 TBX18O95935 607 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 MLNP12872 115 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 XRCC1P18887 633 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 CD97P48960 835 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 MS4A2Q01362 244 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 MTA1Q13330 715 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 ADGRE1Q14246 886 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 USP41Q3LFD5 358 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 ELMSAN1Q6PJG2 1045 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 KCNMB4Q86W47 210 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 MIB1Q86YT6 1006 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 CPNE9Q8IYJ1 553 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 CMTM5Q96DZ9 223 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 FCRL2Q96LA5 508 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 LRGUKQ96M69 825 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 NMUR1Q9HB89 426 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 IGSF9Q9P2J2 1179 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 SCN4AP35499 1836 aa15.72■□□□□ 0.11
SHROOM1-201ENST00000319854 A0A096LPK6 155 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 C9IYK1 514 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 AIM2O14862 343 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 KLHL41O60662 606 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 PBX3P40426 434 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 PSMD7P51665 324 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 GJA9P57773 515 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 MAXP61244 160 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 SEMA3BQ13214 749 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 Q6ZNX1 250 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 ATPAF2Q8N5M1 289 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 RSPH1Q8WYR4 309 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms