RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SIN3BO75182 1162 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 IGSF6O95976 241 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 ASLP04424 464 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 PRKCGP05129 697 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 KIR2DL1P43626 348 aaPredicted RBP15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 RECQLP46063 649 aaPredicted RBP15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 METAP1P53582 386 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 SNRPD1P62314 119 aaKnown RBP15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 SEMG2Q02383 582 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 PREPLQ4J6C6 727 aaPredicted RBP15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 PKN3Q6P5Z2 889 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 IFT20Q8IY31 132 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 IMP4Q96G21 291 aaKnown RBP15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 SLC8A2Q9UPR5 921 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 STON1Q9Y6Q2 735 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 CCDC78A2IDD5 438 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 KLF8O95600 359 aaPredicted RBP15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SLC4A1P02730 911 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 UGT2B4P06133 528 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SRPRAP08240 638 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 PDHA1P08559 390 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SERPINF2P08697 491 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 PIRTP0C851 137 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 TARSP26639 723 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 CRADDP78560 199 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SKOR1P84550 965 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SLC20A2Q08357 652 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SEMA5AQ13591 1074 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 KCNJ11Q14654 390 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SMAD1Q15797 465 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 ZDHHC24Q6UX98 284 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 ZNF852Q6ZMS4 543 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 PPIL6Q8IXY8 311 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 STK40Q8N2I9 435 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 IL17RCQ8NAC3 791 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 OR52K1Q8NGK4 314 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 PRCCQ92733 491 aaPredicted RBP15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 FCRL5Q96RD9 977 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 SLC6A17Q9H1V8 727 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 GDF3Q9NR23 364 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 VPS13AQ96RL7 3174 aa15.58■□□□□ 0.08
PDLIM5-202ENST00000318007 MUC22E2RYF6 1773 aaPredicted RBP15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 GOLGA8CPA6NN73 597 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 A8MX80 341 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 ATP9BO43861 1147 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 CTSLP07711 333 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 TPH1P17752 444 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 CR2P20023 1033 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 FDFT1P37268 417 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 WNT3AP56704 352 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 SESN2P58004 480 aaPredicted RBP15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 CARD16Q5EG05 197 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 KIAA1211LQ6NV74 962 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 SRLQ86TD4 932 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 NAT8LQ8N9F0 302 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 DNAAF3Q8N9W5 541 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 FATE1Q969F0 183 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 IFT43Q96FT9 208 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 MRGPRX2Q96LB1 330 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 NUDCD1Q96RS6 583 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 TMEM245Q9H330 911 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 THAP10Q9P2Z0 257 aaPredicted RBP15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 FAM153AQ9UHL3 310 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 PCDHB9Q9Y5E1 797 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 MYO15AQ9UKN7 3530 aa15.57■□□□□ 0.08
PDLIM5-202ENST00000318007 PLK4O00444 970 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 TIMM44O43615 452 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 LEFTY1O75610 366 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 FAM153BP0C7A2 387 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 DRD1P21728 446 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 ECHS1P30084 290 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 TRAF2Q12933 501 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 CCINQ13939 588 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 HNRNPA1L2Q32P51 320 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 FAM153CQ494X1 144 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 ARSIQ5FYB1 569 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 HIBCHQ6NVY1 386 aaPredicted RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 PPP1R21Q6ZMI0 780 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 GPR161Q8N6U8 529 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 PCDH20Q8N6Y1 951 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 SARDHQ9UL12 918 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 RAI2Q9Y5P3 530 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 ANKRD36A6QL64 1941 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 ANXA9O76027 345 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 AP2A1O95782 977 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 IL1BP01584 269 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 BCL2L1Q07817 233 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 MYLK3Q32MK0 819 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 FNBP1LQ5T0N5 605 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 NCEH1Q6PIU2 408 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 CAPN12Q6ZSI9 719 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 MMAAQ8IVH4 418 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 LPCAT1Q8NF37 534 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 EXOC4Q96A65 974 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 RMDN1Q96DB5 314 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 TRIM56Q9BRZ2 755 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 FAM114A2Q9NRY5 505 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 HAUS2Q9NVX0 235 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms