RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 WASF2Q9Y6W5 498 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 CXorf49A8MYA2 514 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 NCAM2O15394 837 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 BUD23O43709 281 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 FKBP6O75344 327 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ACRP10323 421 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 UQCRBP14927 111 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 PHBP35232 272 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 SERPINB6P35237 376 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 TBL3Q12788 808 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 THOC5Q13769 683 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 SHHQ15465 462 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 MS4A13Q5J8X5 152 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 GRAMD4Q6IC98 578 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ADGRD1Q6QNK2 874 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 PID1Q7Z2X4 250 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 CNTD1Q8N815 330 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 EIF2B3Q9NR50 452 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 NDE1Q9NXR1 346 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 PSMC3IPQ9P2W1 217 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ZC3H7BQ9UGR2 993 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ANAPC1Q9H1A4 1944 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 ARHGAP10A1A4S6 786 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 RASA4BC9J798 803 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 RASA4O43374 803 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 SOD2P04179 222 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 NFKB1P19838 968 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 MX2P20592 715 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 FUT4P22083 530 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 CRADDP78560 199 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 TRIP4Q15650 581 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-201ENST00000317677 FYB2Q5VWT5 728 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 LRRC8BQ6P9F7 803 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 TRMT10BQ6PF06 316 aaKnown RBP13.22□□□□□ -0.29
CPNE1-201ENST00000317677 KLHL35Q6PF15 583 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 ARNTL2Q8WYA1 636 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 C1orf74Q96LT6 269 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 EBNA1BP2Q99848 306 aaKnown RBP13.22□□□□□ -0.29
CPNE1-201ENST00000317677 RBM38Q9H0Z9 239 aaKnown RBP13.22□□□□□ -0.29
CPNE1-201ENST00000317677 XAB2Q9HCS7 855 aaKnown RBP13.22□□□□□ -0.29
CPNE1-201ENST00000317677 PFDN4Q9NQP4 134 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 ARL8BQ9NVJ2 186 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 COMMD8Q9NX08 183 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 SENP1Q9P0U3 644 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 KLHL8Q9P2G9 620 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-201ENST00000317677 VANGL2Q9ULK5 521 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 MYLKQ15746 1914 aa13.22□□□□□ -0.29
CPNE1-201ENST00000317677 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 WASH4PA8MWX3 477 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 FGF10O15520 208 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 MAFKO60675 156 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 SERPINB7O75635 380 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 FAM155BO75949 473 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 CNTN5O94779 1100 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 STK10O94804 968 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 HAUS5O94927 633 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 ABLIM3O94929 683 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 HMBSP08397 361 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 HMGA1P17096 107 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 HTR7P34969 479 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 GALK1P51570 392 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 CHN2P52757 468 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 ACTR3P61158 418 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 RPL10AP62906 217 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 KLHL38Q2WGJ6 581 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 TEX44Q53QW1 395 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 ALFQ53S48 1182 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 C10orf120Q5SQS8 335 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 UNC5BQ8IZJ1 945 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 RTL3Q8N8U3 475 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 IGSF8Q969P0 613 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 LRRC39Q96DD0 335 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 TEKT5Q96M29 485 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 TSGA13Q96PP4 275 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 GBA3Q9H227 469 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 OBSL1O75147 1896 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 SLC12A8A0AV02 714 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 DFFAO00273 331 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 UGT1A9O60656 530 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 USP12O75317 370 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 SPAG7O75391 227 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 JCHAINP01591 159 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 MLNP12872 115 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 PRKCHP24723 683 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 MGAT1P26572 445 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 CDK16Q00536 496 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms