RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TOP6BLQ8N6T0 577 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 RIN3Q8TB24 985 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 SPPL2BQ8TCT7 592 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 SLC16A10Q8TF71 515 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 SLCO4A1Q96BD0 722 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 FAR2Q96K12 515 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 TSGA13Q96PP4 275 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 CACNA2D2Q9NY47 1150 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 FAM95CA0A1B0GW59 222 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 ARHGEF37A1IGU5 675 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 HUS1O60921 280 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 SLC7A1P30825 629 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 ARCN1P48444 511 aaKnown RBP19.31■□□□□ 0.68
RTN4-201ENST00000317610 TKTL1P51854 596 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 EMP3P54852 163 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 MPP1Q00013 466 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 SULT2A1Q06520 285 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 ZNF460Q14592 562 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 XKR4Q5GH76 650 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 CNSTQ6PJW8 725 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 PCDH20Q8N6Y1 951 aaKnown RBP19.31■□□□□ 0.68
RTN4-201ENST00000317610 LRTOMTQ8WZ04 291 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 OSBPL2Q9H1P3 480 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 UBP1Q9NZI7 540 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 CD300AQ9UGN4 299 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 SQORQ9Y6N5 450 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 NUP205Q92621 2012 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 RBM47A0AV96 593 aaKnown RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 H3BNH8 94 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 FBP2O00757 339 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 JCHAINP01591 159 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 CCDC166P0CW27 439 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 KCNE1P15382 129 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 ATP5F1P24539 256 aaPredicted RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 AKAP5P24588 427 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 PDAP1Q13442 181 aaKnown RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 PSMD5Q16401 504 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 NRF1Q16656 503 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 REP15Q6BDI9 236 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 TRIM67Q6ZTA4 783 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 TSPAN18Q96SJ8 248 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 PCDHAC1Q9H158 963 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 MEAF6Q9HAF1 191 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 RSL24D1Q9UHA3 163 aaKnown RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 A0A087X1B8 175 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 HEATR9A2RTY3 570 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 FAM155AB1AL88 458 aaPredicted RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 CXCL11O14625 94 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 GPR32O75388 356 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 ARNTP27540 789 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 CDK9P50750 372 aaKnown RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 DAOAP59103 153 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 ZNF33AQ06730 810 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 C8orf82Q6P1X6 216 aaPredicted RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 ERI1Q8IV48 349 aaKnown RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 CCDC117Q8IWD4 279 aaPredicted RBP19.3■□□□□ 0.68
RTN4-201ENST00000317610 DENND6AQ8IWF6 608 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 LPGAT1Q92604 370 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 CCT7Q99832 543 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 OMDQ99983 421 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 ULBP1Q9BZM6 244 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 POMKQ9H5K3 350 aa19.3■□□□□ 0.68
RTN4-201ENST00000317610 CCDC78A2IDD5 438 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 XPOTO43592 962 aaKnown RBP19.29■□□□□ 0.68
RTN4-201ENST00000317610 KPNA2P52292 529 aaKnown RBP19.29■□□□□ 0.68
RTN4-201ENST00000317610 TUBA4AP68366 448 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 CCNA1P78396 465 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 SOX4Q06945 474 aaPredicted RBP19.29■□□□□ 0.68
RTN4-201ENST00000317610 DCTN2Q13561 401 aaKnown RBP19.29■□□□□ 0.68
RTN4-201ENST00000317610 PCBP1Q15365 356 aaKnown RBP eCLIP19.29■□□□□ 0.686e-8■■□□□ 14.5
RTN4-201ENST00000317610 OLFML2BQ68BL8 750 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 OTUD5Q96G74 571 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 FAM210AQ96ND0 272 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 SEMA6AQ9H2E6 1030 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 VTA1Q9NP79 307 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 PNPLA3Q9NST1 481 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 LMCD1Q9NZU5 365 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 MYLKQ15746 1914 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 A0A0J9YVX5 310 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 PRORSD1PA6NEY8 169 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 YJEFN3A6XGL0 299 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 CTBP1Q13363 440 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 CYTH1Q15438 398 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 ARL13BQ3SXY8 428 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 HACD2Q6Y1H2 254 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 OTOP3Q7RTS5 596 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 HERC6Q8IVU3 1022 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 TRPC4APQ8TEL6 797 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 DIS3LQ8TF46 1054 aaKnown RBP19.29■□□□□ 0.68
RTN4-201ENST00000317610 TBL1YQ9BQ87 522 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 TRPC7Q9HCX4 862 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 SPAG4Q9NPE6 437 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 OLAHQ9NV23 265 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 GTSE1Q9NYZ3 720 aa19.29■□□□□ 0.68
RTN4-201ENST00000317610 AAR2Q9Y312 384 aaKnown RBP19.29■□□□□ 0.68
RTN4-201ENST00000317610 PSMD12O00232 456 aaPredicted RBP19.28■□□□□ 0.68
RTN4-201ENST00000317610 TAS2R39P59534 338 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 LILRA4P59901 499 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 FASTKQ14296 549 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms