RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PEX11BO96011 259 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ALOX12P18054 663 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TM4SF1P30408 202 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ACSL1P33121 698 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 GJC1P36383 396 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 CPA2P48052 419 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ADPRHP54922 357 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MC1RQ01726 317 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 CREB5Q02930 508 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 NEXNQ0ZGT2 675 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MAMLD1Q13495 774 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 LSM12Q3MHD2 195 aaKnown RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM81Q6P7N7 255 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MOB3CQ70IA8 216 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM217Q8N7C4 229 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 NCSTNQ92542 709 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MXD3Q9BW11 206 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MUC13Q9H3R2 512 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 CXorf56Q9H5V9 222 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SCPEP1Q9HB40 452 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TXNRD2Q9NNW7 524 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 DIAPH3Q9NSV4 1193 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ZBTB40Q9NUA8 1239 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 PPP1R14DQ9NXH3 145 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 CTNNAL1Q9UBT7 734 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 COL4A3Q01955 1670 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 GOLGA6L10A0A0M3HER8 536 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 TTC34A8MYJ7 566 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 FOXD2O60548 495 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 SEC31AO94979 1220 aaKnown RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CBX6O95503 412 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 ESRRBO95718 433 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 ADAP00813 363 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CHRM4P08173 479 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 RARGP13631 454 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 GARSP41250 739 aaKnown RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CTCFP49711 727 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 SIM1P81133 766 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 RHAGQ02094 409 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CEBPZQ03701 1054 aaKnown RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 FOXE3Q13461 319 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CUL4AQ13619 759 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 MIIPQ5JXC2 388 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 PDXDC1Q6P996 788 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF474Q6S9Z5 364 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 BRINP3Q76B58 766 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 AMIGO2Q86SJ2 522 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 WDTC1Q8N5D0 677 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 ADPRHL1Q8NDY3 354 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 PDLIM2Q96JY6 352 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 BBC3Q96PG8 261 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CCDC68Q9H2F9 335 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 IL1RAPL1Q9NZN1 696 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF215Q9UL58 517 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 SIRT4Q9Y6E7 314 aaPredicted RBP4.29□□□□□ -1.72
SMCO3-201ENST00000316048 KCNE2Q9Y6J6 123 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 PTPRCP08575 1304 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 MAP3K5Q99683 1374 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CRB1P82279 1406 aa4.29□□□□□ -1.72
SMCO3-201ENST00000316048 CXorf65A6NEN9 183 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM232C9JQI7 657 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 PTGES3LE9PB15 166 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 GTPBP1O00178 669 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 HBP1O60381 514 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 GCATO75600 419 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 NFAT5O94916 1531 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 HNRNPCP07910 306 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 FCGR2AP12318 317 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 COX7A2P14406 83 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 INSRRP14616 1297 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 ST6GAL1P15907 406 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 HOXB9P17482 250 aaPredicted RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TGM2P21980 687 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 NFKBIAP25963 317 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CTSWP56202 376 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 PSMC6P62333 389 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 MST1RQ04912 1400 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF169Q14929 603 aaPredicted RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 ERCC6LQ2NKX8 1250 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 C1orf141Q5JVX7 400 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 ARMC3Q5W041 872 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TTI2Q6NXR4 508 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TRIM72Q6ZMU5 477 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 GHDCQ8N2G8 530 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SRBD1Q8N5C6 995 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CADM4Q8NFZ8 388 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 C5orf34Q96MH7 638 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 NUAK2Q9H093 628 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 C20orf141Q9NUB4 165 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 ARL8BQ9NVJ2 186 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 MIS18AQ9NYP9 233 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SH3BP4Q9P0V3 963 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 MARF1Q9Y4F3 1742 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CAPN7Q9Y6W3 813 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms