RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 THOC5Q13769 683 aaKnown RBP18.56■□□□□ 0.56
CCDC43-201ENST00000315286 ADGRF1Q5T601 910 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 TCEAL8Q8IYN2 117 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 RANBP9Q96S59 729 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 RETREG1Q9H6L5 497 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 MRPL17Q9NRX2 175 aaKnown RBP18.56■□□□□ 0.56
CCDC43-201ENST00000315286 THAP1Q9NVV9 213 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 SMPD4Q9NXE4 827 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 HEY2Q9UBP5 337 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 TRIM33Q9UPN9 1127 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 INSL5Q9Y5Q6 135 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 TEX28O15482 410 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 CLDN11O75508 207 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 UNC5CO95185 931 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 SPATA31D3P0C874 917 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 MYL2P10916 166 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 RAG1P15918 1043 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 GLDCP23378 1020 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 SLC1A2P43004 574 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 USP10Q14694 798 aaKnown RBP18.55■□□□□ 0.56
CCDC43-201ENST00000315286 UGP2Q16851 508 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 CCDC153Q494R4 210 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 TTC31Q49AM3 519 aaPredicted RBP18.55■□□□□ 0.56
CCDC43-201ENST00000315286 TAF1BQ53T94 588 aaPredicted RBP18.55■□□□□ 0.56
CCDC43-201ENST00000315286 TSTD2Q5T7W7 516 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 SPATA31D4Q6ZUB0 917 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 TBC1D1Q86TI0 1168 aaPredicted RBP18.55■□□□□ 0.56
CCDC43-201ENST00000315286 ARID3BQ8IVW6 561 aaPredicted RBP18.55■□□□□ 0.56
CCDC43-201ENST00000315286 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 ZNF599Q96NL3 588 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 CYP2S1Q96SQ9 504 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 YME1L1Q96TA2 773 aa18.55■□□□□ 0.56
CCDC43-201ENST00000315286 ITM2AO43736 263 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 PPP3CCP48454 512 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 EPHB3P54753 998 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ZNF470Q6ECI4 717 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 NEPROQ6NW34 567 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 RAPH1Q70E73 1250 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 CRLF3Q8IUI8 442 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 SLC41A1Q8IVJ1 513 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 MFSD6LQ8IWD5 586 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 KLHL29Q96CT2 875 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 SLC22A12Q96S37 553 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ZNF334Q9HCZ1 680 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ZFP69BQ9UJL9 534 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 PHGDHO43175 533 aaKnown RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 KDELR3O43731 214 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 KITP10721 976 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 CPA3P15088 417 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 SKIV2L2P42285 1042 aaKnown RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 KCNJ2P63252 427 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ZNF177Q13360 481 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 HSF5Q4G112 596 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ARMC3Q5W041 872 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 ASRGL1Q7L266 308 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 C16orf59Q7L2K0 433 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 OTOP2Q7RTS6 562 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 C2CD4AQ8NCU7 369 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 OR13J1Q8NGT2 312 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 MARCOQ9UEW3 520 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-201ENST00000315286 FBXO5Q9UKT4 447 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 KIAA1671Q9BY89 1806 aa18.54■□□□□ 0.56
CCDC43-201ENST00000315286 PTPRSQ13332 1948 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 CFAP73A6NFT4 308 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 MROH6A6NGR9 719 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 SCAMP3O14828 347 aaKnown RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 KIAA0355O15063 1070 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 LILRB3O75022 631 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 EFCAB14O75071 495 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 LYPLA1O75608 230 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 F11P03951 625 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 RHOCP08134 193 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 T-ENOLP0DO92 83 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 MBL2P11226 248 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 TARSP26639 723 aaKnown RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 SERPINB3P29508 390 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 AVPR1AP37288 418 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 OXCT1P55809 520 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 CLNKQ7Z7G1 428 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 KIF2BQ8N4N8 673 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 IFT43Q96FT9 208 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 ZFRQ96KR1 1074 aaKnown RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 FAM167BQ9BTA0 163 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 TLK1Q9UKI8 766 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 PLXNA4Q9HCM2 1894 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 A0A1B0GVM2 712 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 ILVBLA1L0T0 632 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 TCAF2A6NFQ2 919 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 HAUS5O94927 633 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 PAPSS2O95340 614 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-201ENST00000315286 SERPINE1P05121 402 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 SLC1A6P48664 564 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 CDK18Q07002 472 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 ATG14Q6ZNE5 492 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 CHST9Q7L1S5 443 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 CCDC91Q7Z6B0 441 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 FEM1CQ96JP0 617 aa18.53■□□□□ 0.56
CCDC43-201ENST00000315286 MGME1Q9BQP7 344 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms