RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 FAM220AQ7Z4H9 259 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 CYP2W1Q8TAV3 490 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 GALNT8Q9NY28 637 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 CCDC59Q9P031 241 aaKnown RBP13.8□□□□□ -0.2
CLCN6-201ENST00000312413 N6AMT1Q9Y5N5 214 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 SNCAIPQ9Y6H5 919 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 UMODL1Q5DID0 1318 aa13.8□□□□□ -0.2
CLCN6-201ENST00000312413 UNC13BO14795 1591 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 SGTAO43765 313 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 NR2F6P10588 404 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ELAVL2Q12926 359 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 MED22Q15528 200 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 QPCTQ16769 361 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 EGFLAMQ63HQ2 1017 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZC3H7AQ8IWR0 971 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 LENG9Q96B70 501 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 SPATA5L1Q9BVQ7 753 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 PRDM8Q9NQV8 689 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 RPS12P25398 132 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 SLC7A2P52569 658 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 OLR1P78380 273 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 PPP3CAQ08209 521 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 PGM5Q15124 567 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 LPCAT4Q643R3 524 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 NEK5Q6P3R8 708 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 AGBL3Q8NEM8 1001 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 MAGEB10Q96LZ2 347 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 OMDQ99983 421 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 S100A14Q9HCY8 104 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ARL8BQ9NVJ2 186 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ANKDD1BA6NHY2 528 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 AREL1O15033 823 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 TEX28O15482 410 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 PSIP1O75475 530 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 CCNKO75909 580 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 URODP06132 367 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 BACE1P56817 501 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 LIN52Q52LA3 116 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 RNF220Q5VTB9 566 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 WNT8BQ93098 351 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ALOX15BO15296 676 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 NOS2P35228 1153 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 IL18R1Q13478 541 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 C15orf59Q2T9L4 293 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZFP69Q49AA0 526 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 MIIPQ5JXC2 388 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 PLET1Q6UQ28 207 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 TBC1D21Q8IYX1 336 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 PARP8Q8N3A8 854 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 KAZALD1Q96I82 304 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 RTFDC1Q9BY42 306 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 CDH19Q9H159 772 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 C8orf4Q9NR00 106 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 OGDHLQ9ULD0 1010 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 FADS3Q9Y5Q0 445 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 LACTBL1A8MY62 500 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 BANF1O75531 89 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZBTB11O95625 1053 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 DHFRP00374 187 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 HLA-DQA2P01906 255 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 VIL1P09327 827 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 FGRP09769 529 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZNF143P52747 638 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 UGT2B15P54855 530 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 COPZ1P61923 177 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 RPL38P63173 70 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 MTAPQ13126 283 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 CHPFQ8IZ52 775 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 NELL1Q92832 810 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 RNF157Q96PX1 679 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ELOVL4Q9GZR5 314 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 MROH8Q9H579 483 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 ZFP14Q9HCL3 533 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
CLCN6-201ENST00000312413 BTRCQ9Y297 605 aa13.79□□□□□ -0.2
CLCN6-201ENST00000312413 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 KHDRBS3O75525 346 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 TRMUO75648 421 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 PCDH8O95206 1070 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 IDO1P14902 403 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 TCF4P15884 667 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 MARCKSL1P49006 195 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 GMFBP60983 142 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 BBS12Q6ZW61 710 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 BCL2L14Q9BZR8 327 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms