RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PROZP22891 400 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 MATKP42679 507 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 TCEAL1Q15170 157 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 DCAF4L1Q3SXM0 396 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 NOL9Q5SY16 702 aaKnown RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 BNIPLQ7Z465 357 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 CNTRLQ7Z7A1 2325 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 ADAM2Q99965 735 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 COQ10BQ9H8M1 238 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 ASB3Q9Y575 518 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 SNX5Q9Y5X3 404 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 PDLIM1O00151 329 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 MRASO14807 208 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 CHADO15335 359 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 PLIN3O60664 434 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 LTFP02788 710 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 NMBRP28336 390 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 GRK4P32298 578 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 GSSP48637 474 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 FASTKQ14296 549 aaKnown RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 TAF12Q16514 161 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 ATPAF2Q8N5M1 289 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 UBR7Q8N806 425 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 ZFP28Q8NHY6 868 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 BLOC1S5Q8TDH9 187 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 TUBGCP3Q96CW5 907 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 FAM193BQ96PV7 902 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 DGKBQ9Y6T7 804 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 COL11A1P12107 1806 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 HEATR9A2RTY3 570 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 GPR15P49685 360 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 CDH13P55290 713 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 PSME3P61289 254 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 SCIMPQ6UWF3 145 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 WNT8BQ93098 351 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 MYLPFQ96A32 169 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 TMIGD2Q96BF3 282 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 PARK7Q99497 189 aaKnown RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 PKP2Q99959 881 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 ACE2Q9BYF1 805 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 RBM22Q9NW64 420 aaKnown RBP eCLIP12.8□□□□□ -0.364e-8■■■■□ 23.7
RETREG3-201ENST00000309428 GID8Q9NWU2 228 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 UTP6Q9NYH9 597 aaKnown RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 COPG2Q9UBF2 871 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-201ENST00000309428 SSC5DA1L4H1 1573 aa12.8□□□□□ -0.36
RETREG3-201ENST00000309428 RGSL1A5PLK6 1076 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 TRAFD1O14545 582 aaPredicted RBP12.79□□□□□ -0.36
RETREG3-201ENST00000309428 LRIG2O94898 1065 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ITGB1P05556 798 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 C2P06681 752 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ARL13AQ5H913 290 aaPredicted RBP12.79□□□□□ -0.36
RETREG3-201ENST00000309428 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 METTL23Q86XA0 190 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 CFAP52Q8N1V2 620 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 KBTBD7Q8WVZ9 684 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 PTPN18Q99952 460 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 SUN2Q9UH99 717 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 OR51F1A6NGY5 319 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 UBDO15205 165 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 CPB1P15086 417 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 CCNG1P51959 295 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 MYBPC3Q14896 1274 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 TNFAIP8L3Q5GJ75 292 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ZNF470Q6ECI4 717 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ZNF554Q86TJ5 538 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 KCNMB4Q86W47 210 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 NPWQ8N729 165 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 EFHBQ8N7U6 833 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 NIPA2Q8N8Q9 360 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ATAD1Q8NBU5 361 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 FNIP1Q8TF40 1166 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 CERS2Q96G23 380 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 SIGLEC10Q96LC7 697 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 GATA5Q9BWX5 397 aaPredicted RBP12.79□□□□□ -0.36
RETREG3-201ENST00000309428 GPAMQ9HCL2 828 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 PTTG2Q9NZH5 202 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 SLC2A6Q9UGQ3 507 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 DMTF1Q9Y222 760 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 ATP8B3O60423 1300 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 PTPN7P35236 360 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 GABRB2P47870 512 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 RPL14P50914 215 aaKnown RBP12.79□□□□□ -0.36
RETREG3-201ENST00000309428 SLC7A2P52569 658 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 HPCAP84074 193 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 STX5Q13190 355 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 DGCR6Q14129 220 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 MGAT5BQ3V5L5 792 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 FAM35AQ86V20 835 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 MIER2Q8N344 545 aa12.79□□□□□ -0.36
RETREG3-201ENST00000309428 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms