RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ACTN2P35609 894 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 TPMTP51580 245 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 POLR2LP62875 67 aaKnown RBP18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 LMNB2Q03252 620 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 BCL2L1Q07817 233 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 ITKQ08881 620 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 ZNF805Q5CZA5 627 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 ARSIQ5FYB1 569 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 TSSK4Q6SA08 328 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 CHST14Q8NCH0 376 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 GRIN3AQ8TCU5 1115 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 GAB3Q8WWW8 586 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 FAM131CQ96AQ9 280 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 TEKT5Q96M29 485 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 SLC25A51Q9H1U9 297 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 POLR3BQ9NW08 1133 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 FBXL12Q9NXK8 326 aa18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 EVLQ9UI08 416 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 ARIH1Q9Y4X5 557 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-201ENST00000309328 RNF103O00237 685 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 MID1O15344 667 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 LIASO43766 372 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 CTSLP07711 333 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 CD6P30203 668 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 P2RY2P41231 377 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 PAFAH1B1P43034 410 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 FNTBP49356 437 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 ZBTB17Q13105 803 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 NCEH1Q6PIU2 408 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 GANCQ8TET4 914 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 LRRC45Q96CN5 670 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 EXOC2Q96KP1 924 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 SEMA3CQ99985 751 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 BTBD1Q9H0C5 482 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 SEMA4AQ9H3S1 761 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 SUV39H2Q9H5I1 410 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 VPS45Q9NRW7 570 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 KLHL8Q9P2G9 620 aaPredicted RBP18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 FEZ2Q9UHY8 353 aaPredicted RBP18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 DRG1Q9Y295 367 aaKnown RBP18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 TTLL3Q9Y4R7 772 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 NUP205Q92621 2012 aa18.11■□□□□ 0.49
SSSCA1-201ENST00000309328 TCRBV7S2A1N4TA0A589 114 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 C5orf60A6NFR6 353 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 MUSKO15146 869 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 KCNN4O15554 427 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 RPP40O75818 363 aaKnown RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 HLA-DQB2P05538 268 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 UGT2B4P06133 528 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 RBL1P28749 1068 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 TNNT3P45378 269 aaPredicted RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 NEK3P51956 506 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 RPL26P61254 145 aaKnown RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 WASHC5Q12768 1159 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 OASLQ15646 514 aaKnown RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 MAP7D1Q3KQU3 841 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 C4orf22Q6V702 233 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 ERN2Q76MJ5 926 aaKnown RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 NDUFAF2Q8N183 169 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 PGBD5Q8N414 524 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 COG1Q8WTW3 980 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 RTP4Q96DX8 246 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 TPSD1Q9BZJ3 242 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 NOD2Q9HC29 1040 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 DNPEPQ9ULA0 475 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 RPL26L1Q9UNX3 145 aaKnown RBP18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 ZNF148Q9UQR1 794 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 CACNA1IQ9P0X4 2223 aa18.1■□□□□ 0.49
SSSCA1-201ENST00000309328 NYNRINQ9P2P1 1898 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 TSPAN11A1L157 253 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 GOLGA6CA6NDK9 693 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 GOLGA6BA6NDN3 693 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 LRRC72A6NJI9 287 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 HTRA2O43464 458 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 LILRB5O75023 590 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 RNASEH2AO75792 299 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 GOLGA6DP0CG33 693 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 PXNP49023 591 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 TUBB2AQ13885 445 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 P3H1Q32P28 736 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 FBXL19Q6PCT2 694 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 SYT10Q6XYQ8 523 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 PID1Q7Z2X4 250 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 ADAT2Q7Z6V5 191 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 HDDC3Q8N4P3 179 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 PAF1Q8N7H5 531 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 CNTD1Q8N815 330 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 C12orf50Q8NA57 414 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 CADM4Q8NFZ8 388 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 OR6K2Q8NGY2 324 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 ECHDC3Q96DC8 303 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 IMP4Q96G21 291 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 ZNF419Q96HQ0 510 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 C16orf45Q96MC5 204 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 SPATA13Q96N96 652 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 RUNDC3BQ96NL0 473 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms