RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 GKP32189 559 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PTPN7P35236 360 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MPLP40238 635 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SCNN1BP51168 640 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 AP1S1P61966 158 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 BCL2L1Q07817 233 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PPIDQ08752 370 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SLC10A7Q0GE19 358 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CNTN1Q12860 1018 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HNRNPDQ14103 355 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TAZQ16635 292 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF805Q5CZA5 627 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 AGBL4Q5VU57 503 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 DCAF12L1Q5VU92 463 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3GQ6DHY5 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3CQ6IPX1 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 NCEH1Q6PIU2 408 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ERN2Q76MJ5 926 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 RABEPKQ7Z6M1 372 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SRLQ86TD4 932 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3Q8IZP1 549 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 OR2T34Q8NGX1 318 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TFB1MQ8WVM0 346 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PIGKQ92643 395 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ARRDC3Q96B67 414 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HAUS1Q96CS2 278 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 KLHL32Q96NJ5 620 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TSGA13Q96PP4 275 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 FERMT1Q9BQL6 677 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MGME1Q9BQP7 344 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HEMGNQ9BXL5 484 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CPEB1Q9BZB8 566 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 OSBPL8Q9BZF1 889 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 POLR1EQ9GZS1 481 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ARRDC1-AS1Q9H2J1 176 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PREBQ9HCU5 417 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SEPT10Q9P0V9 454 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SUSD2Q9UGT4 822 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TPX2Q9ULW0 747 aaKnown RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 EFR3BQ9Y2G0 817 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ATXN2Q99700 1313 aaKnown RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 BCLAF3A2AJT9 711 aaKnown RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 APOC4-APOC2K7ER74 178 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PLK4O00444 970 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 NEMP1O14524 444 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 DDX3YO15523 660 aaKnown RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PLRG1O43660 514 aaKnown RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 LRP3O75074 770 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PIGNO95427 931 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 APOC2P02655 101 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ADRB3P13945 408 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CCNB1P14635 433 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 GNSP15586 552 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CA4P22748 312 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HOXD12P35452 270 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PTGER3P43115 390 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 CSNK1DP48730 415 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PEX5P50542 639 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 METAP1P53582 386 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 NSUN2Q08J23 767 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SLC10A2Q12908 348 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF211Q13398 564 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 RPS6KA1Q15418 735 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 RALGPS1Q5JS13 557 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PIP5KL1Q5T9C9 394 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 KIAA0895LQ68EN5 471 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 BBS12Q6ZW61 710 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PARS2Q7L3T8 475 aaKnown RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SLC41A1Q8IVJ1 513 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MAML1Q92585 1016 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ALG3Q92685 438 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 FATE1Q969F0 183 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 RAB7BQ96AH8 199 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF419Q96HQ0 510 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HES6Q96HZ4 224 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF641Q96N77 438 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 NUDCD1Q96RS6 583 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 LGMNQ99538 433 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HDAC8Q9BY41 377 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MIR1-1HGQ9H1L0 117 aa11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 C6orf106Q9H6K1 298 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 C16orf96A6NNT2 1141 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 METTL12A8MUP2 240 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 HACD1B0YJ81 288 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 H7C0C1 242 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 INSIG1O15503 277 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MTSS1O43312 755 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 ZNF189O75820 626 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PCDH8O95206 1070 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PEX11BO96011 259 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PYGMP11217 842 aa11.12□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 PECAM1P16284 738 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms