RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 RELL1Q8IUW5 271 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 SHKBP1Q8TBC3 707 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 HSPH1Q92598 858 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 ING2Q9H160 280 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 A0A1W2PPW3 197 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 SAC3D1A6NKF1 404 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 HCRTO43612 131 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 CAPN15O75808 1086 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 APRTP07741 180 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 SAT1P21673 171 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 NFE2Q16621 373 aaPredicted RBP11.03□□□□□ -0.64
LSM3-201ENST00000306024 NDUFA5Q16718 116 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 RNASEH2BQ5TBB1 312 aaKnown RBP11.03□□□□□ -0.64
LSM3-201ENST00000306024 ANKRD22Q5VYY1 191 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 RWDD4Q6NW29 188 aaKnown RBP11.03□□□□□ -0.64
LSM3-201ENST00000306024 FRA10AC1Q70Z53 315 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 KATNAL2Q8IYT4 538 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 ZNF558Q96NG5 402 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 LPIN3Q9BQK8 851 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 BCO2Q9BYV7 579 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 PLLPQ9Y342 182 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 DEAF1O75398 565 aaPredicted RBP11.03□□□□□ -0.64
LSM3-201ENST00000306024 CFHP08603 1231 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 TRPC1P48995 793 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 TUFMP49411 452 aaKnown RBP11.03□□□□□ -0.64
LSM3-201ENST00000306024 GAD2Q05329 585 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 NME3Q13232 169 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
LSM3-201ENST00000306024 SLC39A12Q504Y0 691 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 VWA5B1Q5TIE3 1220 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 DCDC5Q6ZRR9 648 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 VCPIP1Q96JH7 1222 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 BIRC8Q96P09 236 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 OSBPL11Q9BXB4 747 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 CEP44Q9C0F1 390 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 VPS51Q9UID3 782 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 CDH9Q9ULB4 789 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 STAP1Q9ULZ2 295 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 PCDHB12Q9Y5F1 795 aa11.03□□□□□ -0.64
LSM3-201ENST00000306024 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 IGHA2P01877 340 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 KRT8P05787 483 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 KLRC2P26717 231 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 LRPAP1P30533 357 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 ETFBP38117 255 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 PPIGQ13427 754 aaKnown RBP eCLIP11.02□□□□□ -0.64
LSM3-201ENST00000306024 MBTPS1Q14703 1052 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 CARTPTQ16568 116 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 LRRC26Q2I0M4 334 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 TFDP3Q5H9I0 405 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 OGFRL1Q5TC84 451 aaPredicted RBP11.02□□□□□ -0.64
LSM3-201ENST00000306024 MRPL10Q7Z7H8 261 aaKnown RBP11.02□□□□□ -0.64
LSM3-201ENST00000306024 HEATR4Q86WZ0 1026 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 ARMC5Q96C12 935 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 ITPKCQ96DU7 683 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 CCDC106Q9BWC9 280 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 OSBPL10Q9BXB5 764 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 PNPOQ9NVS9 261 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 PKD2L2Q9NZM6 624 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 EBF1Q9UH73 591 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 ADAM28Q9UKQ2 775 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 ZSWIM8A7E2V4 1837 aa11.02□□□□□ -0.64
LSM3-201ENST00000306024 CLUHO75153 1309 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 CAPN14A8MX76 684 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 H7C4K7 107 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 EFCAB14O75071 495 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 URODP06132 367 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 AOC1P19801 751 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ITGAXP20702 1163 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 TYK2P29597 1187 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 TPTEP56180 551 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ADIGQ0VDE8 80 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 TGFBIQ15582 683 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 TAS2R42Q7RTR8 314 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 DCAKDQ8WVC6 231 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 C1orf50Q9BV19 199 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 NR2E3Q9Y5X4 410 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ZNF236Q9UL36 1845 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 PTK2BQ14289 1009 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 CYP2A13Q16696 494 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 PTPN20Q4JDL3 420 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 N4BP2L1Q5TBK1 243 aaPredicted RBP11.02□□□□□ -0.65
LSM3-201ENST00000306024 PIGZQ86VD9 579 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ANKRD52Q8NB46 1076 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 STARD8Q92502 1023 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 ISOC1Q96CN7 298 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 SLC4A5Q9BY07 1137 aa11.02□□□□□ -0.65
LSM3-201ENST00000306024 FRMD8Q9BZ67 464 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms