RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 BCL2L1Q07817 233 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 OASLQ15646 514 aaKnown RBP8.96□□□□□ -0.98
VPREB1-201ENST00000302273 CST6Q15828 149 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 PARP6Q2NL67 630 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ARMC3Q5W041 872 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 KIAA1211LQ6NV74 962 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 NCEH1Q6PIU2 408 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 GDPD4Q6W3E5 623 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ARHGAP36Q6ZRI8 547 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 Q6ZVU0 165 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 MAML2Q8IZL2 1156 aaPredicted RBP8.96□□□□□ -0.98
VPREB1-201ENST00000302273 TSEN2Q8NCE0 465 aaKnown RBP8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ZBTB44Q8NCP5 570 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 CADM4Q8NFZ8 388 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 GRK7Q8WTQ7 553 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 SLCO2A1Q92959 643 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ECHDC3Q96DC8 303 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 SPACA7Q96KW9 195 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 SPATA13Q96N96 652 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 FCRL5Q96RD9 977 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 C19orf43Q9BQ61 176 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ADGRE3Q9BY15 652 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 PABPC3Q9H361 631 aaKnown RBP8.96□□□□□ -0.98
VPREB1-201ENST00000302273 USP29Q9HBJ7 922 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 SGK2Q9HBY8 427 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ZDHHC4Q9NPG8 344 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 DYRK4Q9NR20 520 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 KCTD5Q9NXV2 234 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 GOLGA6AQ9NYA3 693 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 SAE1Q9UBE0 346 aaPredicted RBP8.96□□□□□ -0.98
VPREB1-201ENST00000302273 LHX3Q9UBR4 397 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 DNPEPQ9ULA0 475 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 ZNF148Q9UQR1 794 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
VPREB1-201ENST00000302273 COL4A3Q01955 1670 aa8.96□□□□□ -0.98
VPREB1-201ENST00000302273 TSPAN11A1L157 253 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 KCNK1O00180 336 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 RNF103O00237 685 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 KRIT1O00522 736 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 NDC80O14777 642 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 HTRA2O43464 458 aaPredicted RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 AP1G1O43747 822 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 GAS8O95995 478 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 IL1BP01584 269 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 HLA-EP13747 358 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 NDUFV2P19404 249 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 PTPN3P26045 913 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 RBL1P28749 1068 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 CXCR5P32302 372 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 TNNT3P45378 269 aaPredicted RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 SCNN1BP51168 640 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 DNA2P51530 1060 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 CKAP4Q07065 602 aaKnown RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 WASHC5Q12768 1159 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 MPP3Q13368 585 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 PRPSAP1Q14558 356 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 ANGPT1Q15389 498 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 SIX1Q15475 284 aaPredicted RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 ANO7Q6IWH7 933 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 CCDC70Q6NSX1 233 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 PKN3Q6P5Z2 889 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 NPNTQ6UXI9 565 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 SYDE1Q6ZW31 735 aaPredicted RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 PID1Q7Z2X4 250 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 ZNF572Q7Z3I7 529 aaPredicted RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 MMAAQ8IVH4 418 aaKnown RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 TP53INP2Q8IXH6 220 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 KLHDC8BQ8IXV7 354 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 STK40Q8N2I9 435 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 RYBPQ8N488 228 aaPredicted RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 CNTD1Q8N815 330 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 MDGA1Q8NFP4 955 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 COG1Q8WTW3 980 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 TADA1Q96BN2 335 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 IMP4Q96G21 291 aaKnown RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 ZC3H10Q96K80 434 aaKnown RBP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 HERPUD2Q9BSE4 406 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 SUV39H2Q9H5I1 410 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 BCCIPQ9P287 314 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPREB1-201ENST00000302273 PPIL1Q9Y3C6 166 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 MRFAP1Q9Y605 127 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 WASF2Q9Y6W5 498 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 KIAA1549LQ6ZVL6 1849 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 CFAP54Q96N23 3096 aa8.95□□□□□ -0.98
VPREB1-201ENST00000302273 ZNF318Q5VUA4 2279 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 DOCK4Q8N1I0 1966 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 LRRC72A6NJI9 287 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 H0Y858 1186 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 TRAFD1O14545 582 aaPredicted RBP8.94□□□□□ -0.98
VPREB1-201ENST00000302273 KCNN4O15554 427 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 TSPAN6O43657 245 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 LILRB5O75023 590 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 LEFTY1O75610 366 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 SP9P0CG40 484 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 CD6P30203 668 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 P2RY2P41231 377 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 WASP42768 502 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 TPMTP51580 245 aa8.94□□□□□ -0.98
VPREB1-201ENST00000302273 NEK3P51956 506 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms