RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ISLR2Q6UXK2 745 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 TRPV1Q8NER1 839 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 GPR78Q96P69 363 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ACBD6Q9BR61 282 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 RTKNQ9BST9 563 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 SENP6Q9GZR1 1112 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 OSBPL2Q9H1P3 480 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 NMUR1Q9HB89 426 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CYP4F12Q9HCS2 524 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 UNCXA6NJT0 531 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 TARM1B6A8C7 271 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 CACNG3O60359 315 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 STMN1P16949 149 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 GRIK1P39086 918 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-204ENST00000300862 HNRNPDQ14103 355 aaKnown RBP13.04□□□□□ -0.32
HIF3A-204ENST00000300862 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 METTL23Q86XA0 190 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 SCN4BQ8IWT1 228 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 DSELQ8IZU8 1212 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 PPHLN1Q8NEY8 458 aaKnown RBP13.04□□□□□ -0.32
HIF3A-204ENST00000300862 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 FCRL5Q96RD9 977 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 CDRT15Q96T59 188 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 PADI3Q9ULW8 664 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 GIT1Q9Y2X7 761 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 H3BNX3 289 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 MATN3O15232 486 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 CAPN15O75808 1086 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 ANXA9O76027 345 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 IGLV3-25P01717 112 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 ENO3P13929 434 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-204ENST00000300862 THPOP40225 353 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 THOP1P52888 689 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 PLK1P53350 603 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 CSHL1Q14406 222 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 METTL21CQ5VZV1 264 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 OVOS1Q6IE37 1185 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 PDSS2Q86YH6 399 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 TXNDC5Q8NBS9 432 aaKnown RBP13.04□□□□□ -0.32
HIF3A-204ENST00000300862 FAM81AQ8TBF8 368 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 HEXDCQ8WVB3 486 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 IRGQQ8WZA9 623 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 IL12RB2Q99665 862 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 CENPKQ9BS16 269 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 ARHGEF38Q9NXL2 777 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 ANKRD6Q9Y2G4 727 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 MTF2Q9Y483 593 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-204ENST00000300862 TCAF1Q9Y4C2 921 aa13.04□□□□□ -0.32
HIF3A-204ENST00000300862 RGSL1A5PLK6 1076 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 H2AFYO75367 372 aaKnown RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 APOA4P06727 396 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 THRAP10827 490 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 CCR1P32246 355 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 PRKAA1Q13131 559 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 CYLC2Q14093 348 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 GRAMD1BQ3KR37 738 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 ARTNQ5T4W7 220 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 LDB1Q86U70 411 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 MRGPRX2Q96LB1 330 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 KLHL5Q96PQ7 755 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 PKMYT1Q99640 499 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 FBXO5Q9UKT4 447 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 CDYLQ9Y232 598 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 XRCC1P18887 633 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 TCN1P20061 433 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 KCNA5P22460 613 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 PRDX6P30041 224 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 ADRA1AP35348 466 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 HADHAP40939 763 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 DPP6P42658 865 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 ITKQ08881 620 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 LSAMPQ13449 338 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 EIF4EBP2Q13542 120 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 SH2D4BQ5SQS7 431 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 SDCCAG8Q86SQ7 713 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-204ENST00000300862 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 SNX31Q8N9S9 440 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 KYQ8NBH2 561 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 DTNBP1Q96EV8 351 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 NPAS2Q99743 824 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 KLHL4Q9C0H6 718 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 POMKQ9H5K3 350 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 TNFRSF12AQ9NP84 129 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 ZDHHC7Q9NXF8 308 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 GTSE1Q9NYZ3 720 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 MID2Q9UJV3 735 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 HS3ST4Q9Y661 456 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
HIF3A-204ENST00000300862 MYLKQ15746 1914 aa13.02□□□□□ -0.32
HIF3A-204ENST00000300862 A0A1W2PQH9 124 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms