RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 C9orf72Q96LT7 481 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 PCDHB18PQ96TA0 734 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 PAIP1Q9H074 479 aaKnown RBP9.26□□□□□ -0.93
MMP3-201ENST00000299855 MANSC1Q9H8J5 431 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 NPHS2Q9NP85 383 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 FARSBQ9NSD9 589 aaKnown RBP9.26□□□□□ -0.93
MMP3-201ENST00000299855 KANSL3Q9P2N6 904 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 PSMC3IPQ9P2W1 217 aaPredicted RBP9.26□□□□□ -0.93
MMP3-201ENST00000299855 MBD1Q9UIS9 605 aaPredicted RBP9.26□□□□□ -0.93
MMP3-201ENST00000299855 ZNRF3Q9ULT6 936 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 CAMK2AQ9UQM7 478 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 TNFSF13BQ9Y275 285 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 TRPV2Q9Y5S1 764 aa9.26□□□□□ -0.93
MMP3-201ENST00000299855 IRS2Q9Y4H2 1338 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 TRBV23-1A0A0A0MS06 115 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 UPK3BL1B0FP48 263 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 UPK3BL2E5RIL1 263 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 F8W810 466 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 DNALI1O14645 258 aaPredicted RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 CASC3O15234 703 aaKnown RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 LRRN2O75325 713 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 BCAS2O75934 225 aaPredicted RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 RECQL4O94761 1208 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 SEC24DO94855 1032 aaPredicted RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 TMCC1O94876 653 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 GSNP06396 782 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 PRR35P0CG20 571 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 PTBP1P26599 531 aaKnown RBP eCLIP9.25□□□□□ -0.93
MMP3-201ENST00000299855 ADSLP30566 484 aaPredicted RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 RTP1P59025 263 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 ACTR3P61158 418 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 THOC5Q13769 683 aaKnown RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 TRIM25Q14258 630 aaKnown RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 ACAP2Q15057 778 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 TBCCQ15814 346 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 CLEC16AQ2KHT3 1053 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 DNAL1Q4LDG9 190 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 EPC2Q52LR7 807 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 PPP6R3Q5H9R7 873 aaPredicted RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 ISLR2Q6UXK2 745 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 C1orf186Q6ZWK4 172 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 SLC51AQ86UW1 340 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 CHSY1Q86X52 802 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 NAT14Q8WUY8 206 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 GFM2Q969S9 779 aaKnown RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 LRRC39Q96DD0 335 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 DGCR14Q96DF8 476 aaKnown RBP9.25□□□□□ -0.93
MMP3-201ENST00000299855 FEM1CQ96JP0 617 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 NTMT1Q9BV86 223 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 PINK1Q9BXM7 581 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 ANO3Q9BYT9 981 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 EPS8L2Q9H6S3 715 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 KCNK13Q9HB14 408 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 TUFT1Q9NNX1 390 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 AGPAT3Q9NRZ7 376 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 CD300AQ9UGN4 299 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 NAALAD2Q9Y3Q0 740 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 PCDHGA10Q9Y5H3 936 aa9.25□□□□□ -0.93
MMP3-201ENST00000299855 TAF1P21675 1872 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 FER1L6Q2WGJ9 1857 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 IGKV6D-41A0A0C4DH26 115 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 A0A1B0GWJ7 208 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 KLF11O14901 512 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 PER2O15055 1255 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 PPP1R11O60927 126 aaPredicted RBP9.24□□□□□ -0.93
MMP3-201ENST00000299855 CLN5O75503 358 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 TUSC2O75896 110 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CRTAMO95727 393 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 ALDH1A1P00352 501 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 ASLP04424 464 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CYP1A1P04798 512 aaPredicted RBP9.24□□□□□ -0.93
MMP3-201ENST00000299855 WEE2P0C1S8 567 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 GAAP10253 952 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 GLRA2P23416 452 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CIITAP33076 1130 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 ADRA1BP35368 520 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 ZNF41P51814 821 aaPredicted RBP9.24□□□□□ -0.93
MMP3-201ENST00000299855 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
MMP3-201ENST00000299855 IRX4P78413 519 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CREB5Q02930 508 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 TAP2Q03519 686 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 NIPAL4Q0D2K0 466 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 MED21Q13503 144 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 AANATQ16613 207 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 ZC2HC1CQ53FD0 456 aaPredicted RBP9.24□□□□□ -0.93
MMP3-201ENST00000299855 FSCBQ5H9T9 825 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 EFHC2Q5JST6 749 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CES4AQ5XG92 561 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 SEZ6L2Q6UXD5 910 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 KYAT3Q6YP21 454 aaKnown RBP9.24□□□□□ -0.93
MMP3-201ENST00000299855 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 MAPKAPK5Q8IW41 473 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 KBTBD2Q8IY47 623 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 C3orf58Q8NDZ4 430 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CALML6Q8TD86 181 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 GANCQ8TET4 914 aa9.24□□□□□ -0.93
MMP3-201ENST00000299855 CELF1Q92879 486 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms