RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 EPGNQ6UW88 154 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
CTDP1-202ENST00000299543 ICA1LQ8NDH6 482 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 FNDC8Q8TC99 324 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 ACTRT2Q8TDY3 377 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 NXNL1Q96CM4 212 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 FICDQ9BVA6 458 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 FAM124BQ9H5Z6 455 aaPredicted RBP13.61□□□□□ -0.23
CTDP1-202ENST00000299543 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 XPR1Q9UBH6 696 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 CIDEBQ9UHD4 219 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 CPA4Q9UI42 421 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 FBXW11Q9UKB1 542 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 SHROOM3Q8TF72 1996 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 PTGESO14684 152 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 STRNO43815 780 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 AHSGP02765 367 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 ARSAP15289 507 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 CHN2P52757 468 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 SH3BGRP55822 239 aaPredicted RBP13.61□□□□□ -0.23
CTDP1-202ENST00000299543 FOLH1Q04609 750 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 ATP1A4Q13733 1029 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 UBXN11Q5T124 520 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 AMIGO2Q86SJ2 522 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 FSTL5Q8N475 847 aaPredicted RBP13.61□□□□□ -0.23
CTDP1-202ENST00000299543 PPP1R10Q96QC0 940 aaKnown RBP13.61□□□□□ -0.23
CTDP1-202ENST00000299543 ADA2Q9NZK5 511 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 SLC2A6Q9UGQ3 507 aa13.61□□□□□ -0.23
CTDP1-202ENST00000299543 MPOP05164 745 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CDH17Q12864 832 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 NAB1Q13506 487 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 FLOT2Q14254 428 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 NOMO2Q5JPE7 1267 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 TRIML2Q8N7C3 387 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SCAMP5Q8TAC9 235 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 ZSCAN18Q8TBC5 510 aaPredicted RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 FSD1LQ9BXM9 530 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 GBA3Q9H227 469 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 COPS7BQ9H9Q2 264 aaPredicted RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CASS4Q9NQ75 786 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 MSI1O43347 362 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 B3GAT3O94766 335 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 POMCP01189 267 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 TSPAN8P19075 237 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SCNN1AP37088 669 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CHRNA4P43681 627 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SCNN1GP51170 649 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CDK18Q07002 472 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 LPIN1Q14693 890 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 ANO4Q32M45 955 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 IQSEC1Q6DN90 963 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 NAPEPLDQ6IQ20 393 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 ZMIZ2Q8NF64 920 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 DHRS1Q96LJ7 313 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 NPAS2Q99743 824 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 IL22Q9GZX6 179 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 STN1Q9H668 368 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SUN2Q9UH99 717 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SFMBT1Q9UHJ3 866 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 SMIM35A0A1B0GVV1 85 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 HDAC3O15379 428 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CCNT2O60583 730 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 THRAP10827 490 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 RPL10P27635 214 aaKnown RBP13.6□□□□□ -0.23
CTDP1-202ENST00000299543 RCVRNP35243 200 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CSHL1Q14406 222 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 PLEKHH3Q7Z736 793 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 DSELQ8IZU8 1212 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 TOP6BLQ8N6T0 577 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 KYQ8NBH2 561 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 EXT2Q93063 718 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 PHF21BQ96EK2 531 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 LRGUKQ96M69 825 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 ACOT9Q9Y305 439 aa13.6□□□□□ -0.23
CTDP1-202ENST00000299543 CCL22O00626 93 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 WARSP23381 471 aaKnown RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 PSEN2P49810 448 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 THOP1P52888 689 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 CCDC80Q76M96 950 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 TAC4Q86UU9 113 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 PCDH20Q8N6Y1 951 aaKnown RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 DIS3LQ8TF46 1054 aaKnown RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 BRI3BPQ8WY22 251 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 TEKT5Q96M29 485 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 OXSMQ9NWU1 459 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 MIOSQ9NXC5 875 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 CDYLQ9Y232 598 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 DTNAQ9Y4J8 743 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 TRIP12Q14669 1992 aaPredicted RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 FBP2O00757 339 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 SERPINB7O75635 380 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms