RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 FNDC3BQ53EP0 1204 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SETMARQ53H47 684 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FBXO42Q6P3S6 717 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 GPSM1Q86YR5 675 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 KBTBD2Q8IY47 623 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FAR1Q8WVX9 515 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 AHCYL2Q96HN2 611 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 TMEM216Q9P0N5 145 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZNRF3Q9ULT6 936 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FAM237BA0A1B0GVD1 139 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SUPT20HL2P0C7V6 817 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF7P17097 686 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ADSSP30520 456 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SLC9A3P48764 834 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ABATP80404 500 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 AMPD2Q01433 879 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PTGES3Q15185 160 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF484Q5JVG2 852 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SMIM5Q71RC9 77 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 DAW1Q8N136 415 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 COL26A1Q96A83 441 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 BTBD9Q96Q07 612 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 NINJ2Q9NZG7 142 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PNPLA6Q8IY17 1366 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CHRNGP07510 517 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MSLNQ13421 630 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 AGMOQ6ZNB7 445 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 GALNT15Q8N3T1 639 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MYOZ2Q9NPC6 264 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 A0A096LPK6 155 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PCP4L1A6NKN8 68 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 RAMP2O60895 175 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CXCL8P10145 99 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 GRIA3P42263 894 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CRADDP78560 199 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FAAP100Q0VG06 881 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 TCEA2Q15560 299 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 C16orf59Q7L2K0 433 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZHX1-C8orf76Q96EF9 292 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SMARCD1Q96GM5 515 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SPACA7Q96KW9 195 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 LRMDAQ9H2I8 198 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SLC6A15Q9H2J7 730 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MLXQ9UH92 298 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 GNPTGQ9UJJ9 305 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CDH9Q9ULB4 789 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CORO2BQ9UQ03 480 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FDPSP14324 419 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MYL9P24844 172 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 RPL14P50914 215 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PTPN5P54829 565 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MYBPC1Q00872 1141 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MTAPQ13126 283 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PLD1Q13393 1074 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CAMK1DQ8IU85 385 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZC3H10Q96K80 434 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 MAF1Q9H063 256 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 PNPLA8Q9NP80 782 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FAM86B1E9PN63 330 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 COX4I1P13073 169 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ADRA1DP25100 572 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SSTR1P30872 391 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 FAUP35544 74 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CASP5P51878 434 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 NOGQ13253 232 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ACTL9Q8TC94 416 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZKSCAN4Q969J2 545 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
CPSF2-201ENST00000298875 RACGAP1Q9H0H5 632 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 SPAG4Q9NPE6 437 aa5.61□□□□□ -1.51
CPSF2-201ENST00000298875 CYP11B2P19099 503 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PIK3CGP48736 1102 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 BCL2L1Q07817 233 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 SNAP47Q5SQN1 464 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF540Q8NDQ6 660 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TATDN2Q93075 761 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ARL15Q9NXU5 204 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 EIF2S3P41091 472 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 OMPP47874 163 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TUBP50607 506 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CBFBQ13951 182 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CD302Q8IX05 232 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 LRRN4CLQ8ND94 238 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 AGBL3Q8NEM8 1001 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MBOAT7Q96N66 472 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 HTATIP2Q9BUP3 242 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GLS2Q9UI32 602 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ACSL4O60488 711 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 KRT33AO76009 404 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ATP5F1P24539 256 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 RPL9P32969 192 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 NFIXQ14938 502 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 USP45Q70EL2 814 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ANKRD23Q86SG2 305 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ABRAQ8N0Z2 381 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 EFCAB3Q8N7B9 438 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms