RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 AP4E1Q9UPM8 1137 aa13.65□□□□□ -0.22
RPUSD4-201ENST00000298317 ITM2BQ9Y287 266 aa13.65□□□□□ -0.22
RPUSD4-201ENST00000298317 DLX3O60479 287 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 CLPXO76031 633 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 HDCP19113 662 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 MATN1P21941 496 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 RGS7P49802 495 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 HLCSP50747 726 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 FASTKQ14296 549 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 TRIM16LQ309B1 348 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ANO4Q32M45 955 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 C6orf183Q5T699 404 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 SPRED1Q7Z699 444 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 LPAR1Q92633 364 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ZUFSPQ96AP4 578 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 P2RY11Q96G91 374 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ZNF641Q96N77 438 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 GPR22Q99680 433 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 C9orf16Q9BUW7 83 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 CYP3A43Q9HB55 503 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 MRASO14807 208 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 NPHS1O60500 1241 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 IL18RAPO95256 599 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 CLIC3O95833 236 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 BCL10O95999 233 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ASNSP08243 561 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ETFBP38117 255 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 HADHAP40939 763 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 GLUD2P49448 558 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 MLLT10P55197 1068 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 OLIG2Q13516 323 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 NEDD8Q15843 81 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 TBCELQ5QJ74 424 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 TMEM214Q6NUQ4 689 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 C14orf80Q86SX3 495 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ZBTB46Q86UZ6 589 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 ANKRD13AQ8IZ07 590 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 FSTL5Q8N475 847 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 OR52K1Q8NGK4 314 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 PNPT1Q8TCS8 783 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 PSD2Q9BQI7 771 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 YTHDF1Q9BYJ9 559 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 C8orf4Q9NR00 106 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 CPQQ9Y646 472 aa13.64□□□□□ -0.23
RPUSD4-201ENST00000298317 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 NRP1O14786 923 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 ACOX3O15254 700 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 CLOCKO15516 846 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 MFSD11O43934 449 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 RASAL1O95294 804 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 PRKCBP05771 671 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SNRPB2P08579 225 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 GLRBP48167 497 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC7A2P52569 658 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 ATXN1P54253 815 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 AGKQ53H12 422 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 TSTD2Q5T7W7 516 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 ANKK1Q8NFD2 765 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 CCDC138Q96M89 665 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 TSNARE1Q96NA8 513 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 ALPK1Q96QP1 1244 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 GPN2Q9H9Y4 310 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 CCDC167Q9P0B6 97 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SCHIP1Q9P0W5 487 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 TLK1Q9UKI8 766 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC39A10Q9ULF5 831 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 C1orf232A0A0U1RR37 186 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 AQP12BA6NM10 295 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SEC14L2O76054 403 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 NFICP08651 508 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 JUNBP17275 347 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 LRPAP1P30533 357 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 CAPGP40121 348 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 PTPN9P43378 593 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 IREB2P48200 963 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 DGKZQ13574 1117 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 GRM3Q14832 879 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 PMF1Q6P1K2 205 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 KCNMB4Q86W47 210 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 AQP12AQ8IXF9 295 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 OFCC1Q8IZS5 231 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 CENPLQ8N0S6 344 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 ZNF567Q8N184 647 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 SHCBP1Q8NEM2 672 aa13.63□□□□□ -0.23
RPUSD4-201ENST00000298317 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms