RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MYL4P12829 197 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ALADP13716 330 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 HSP90AA5PQ58FG0 334 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ZNF783Q6ZMS7 281 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 RGS9BPQ6ZS82 235 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 CACNA2D3Q8IZS8 1091 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SLC25A41Q8N5S1 370 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SLC22A17Q8WUG5 538 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SEC16BQ96JE7 1060 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SRPK1Q96SB4 655 aaKnown RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 PRKAG3Q9UGI9 489 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 TTC24A2A3L6 582 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 C1RP00736 705 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 CLCN4P51793 760 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 UBE3AQ05086 875 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 IHHQ14623 411 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 RFTN1Q14699 578 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 RNF219Q5W0B1 726 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 ALG1LQ6GMV1 187 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 SPATS2Q86XZ4 545 aaKnown RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 FAM217AQ8IXS0 508 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 AGAP2Q99490 1192 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 MGME1Q9BQP7 344 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 C17orf80Q9BSJ5 609 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 CINPQ9BW66 212 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 PRKD2Q9BZL6 878 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 MUC3BQ9H195 1237 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 C12orf65Q9H3J6 166 aaKnown RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 PCMTD2Q9NV79 361 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 MTCL1Q9Y4B5 1905 aaKnown RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 GFRA2O00451 464 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 GLDCP23378 1020 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 MAGEA8P43361 318 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 SERPINH1P50454 418 aaKnown RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 SEPT6Q14141 434 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 MICALCLQ6ZW33 695 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 STRA8Q7Z7C7 330 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 CARNMT1Q8N4J0 409 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 ACMSDQ8TDX5 336 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 FAM111AQ96PZ2 611 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 RBBP8Q99708 897 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 IARS2Q9NSE4 1012 aaKnown RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 NSMCE4AQ9NXX6 385 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 GGA2Q9UJY4 613 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 RABL2BQ9UNT1 228 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 ACTL7AQ9Y615 435 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 H0Y626 953 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 GJA1P17302 382 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 PFKLP17858 780 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 ETV4P43268 484 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 CDHR3Q6ZTQ4 885 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 PIGWQ7Z7B1 504 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 NDUFAF2Q8N183 169 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 TTC16Q8NEE8 873 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 LRRC8CQ8TDW0 803 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 TMA16Q96EY4 203 aaKnown RBP14.42□□□□□ -0.1
C9orf3-202ENST00000297979 PSKH2Q96QS6 385 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 RANBP9Q96S59 729 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 SLC13A1Q9BZW2 595 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 CFAP97Q9P2B7 532 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 ZNF510Q9Y2H8 683 aa14.42□□□□□ -0.1
C9orf3-202ENST00000297979 HEATR9A2RTY3 570 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 C5orf67F2Z3F1 127 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 CBX4O00257 560 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 LUC7L3O95232 432 aaKnown RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 ALDOAP04075 364 aaKnown RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 DHRS4L1P0CG22 281 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 PAMP19021 973 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 SPRP35270 261 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 LIMK2P53671 638 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 CSE1LP55060 971 aaKnown RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 PDE1BQ01064 536 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 STXBP5Q5T5C0 1151 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 RTL10Q7L3V2 364 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 THOC1Q96FV9 657 aaKnown RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 FEM1CQ96JP0 617 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 SPOCK3Q9BQ16 436 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 ELAC2Q9BQ52 826 aaKnown RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 LBHD1Q9BQE6 289 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 VPS11Q9H270 941 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 TREX1Q9NSU2 369 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 LOC285095A0A1B0GVY8 99 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 NRG2O14511 850 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 TPP1O14773 563 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 GJB3O75712 270 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 SERPINF2P08697 491 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 ABL2P42684 1182 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 SIRPB2Q5JXA9 342 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 ESRP1Q6NXG1 681 aaKnown RBP14.41□□□□□ -0.1
C9orf3-202ENST00000297979 HTR3DQ70Z44 454 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 CCDC197Q8NCU1 140 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 IFT43Q96FT9 208 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 PLLPQ9Y342 182 aa14.41□□□□□ -0.1
C9orf3-202ENST00000297979 ATXN1LP0C7T5 689 aaKnown RBP14.4□□□□□ -0.1
C9orf3-202ENST00000297979 CRHR1P34998 444 aa14.4□□□□□ -0.1
C9orf3-202ENST00000297979 SLC14A2Q15849 920 aa14.4□□□□□ -0.1
C9orf3-202ENST00000297979 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
C9orf3-202ENST00000297979 MAN1C1Q9NR34 630 aa14.4□□□□□ -0.1
C9orf3-202ENST00000297979 HCFC1R1Q9NWW0 138 aa14.4□□□□□ -0.1
C9orf3-202ENST00000297979 SLC2A6Q9UGQ3 507 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms