RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ALKAL1Q6UXT8 129 aa15.77■□□□□ 0.12
UBAP1-201ENST00000297661 BNC2Q6ZN30 1099 aaPredicted RBP15.77■□□□□ 0.12
UBAP1-201ENST00000297661 ZNF781Q8N8C0 355 aa15.77■□□□□ 0.12
UBAP1-201ENST00000297661 TMEM102Q8N9M5 508 aaPredicted RBP15.77■□□□□ 0.12
UBAP1-201ENST00000297661 RAET1EQ8TD07 263 aa15.77■□□□□ 0.12
UBAP1-201ENST00000297661 ISOC1Q96CN7 298 aa15.77■□□□□ 0.12
UBAP1-201ENST00000297661 UNKQ9C0B0 810 aaKnown RBP15.77■□□□□ 0.12
UBAP1-201ENST00000297661 ARMC7Q9H6L4 198 aa15.77■□□□□ 0.12
UBAP1-201ENST00000297661 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
UBAP1-201ENST00000297661 UBQLN1Q9UMX0 589 aaKnown RBP15.77■□□□□ 0.12
UBAP1-201ENST00000297661 GOLGA8QA0A0J9YX86 632 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 GOLGA8OA6NCC3 632 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 MEIS3P2A8K0S8 358 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 GOLGA8NF8WBI6 632 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 FUCA1P04066 466 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 POLBP06746 335 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 CYP2C9P11712 490 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 HMOX2P30519 316 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 CDH15P55291 814 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 TXNL4AP83876 142 aaKnown RBP15.77■□□□□ 0.11
UBAP1-201ENST00000297661 MAP2K5Q13163 448 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 PIGGQ5H8A4 983 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 MORN1Q5T089 497 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 CPNE9Q8IYJ1 553 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 DSELQ8IZU8 1212 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 NPWQ8N729 165 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 TRPC4APQ8TEL6 797 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 TRIB2Q92519 343 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 USP13Q92995 863 aaPredicted RBP15.77■□□□□ 0.11
UBAP1-201ENST00000297661 LRRC4Q9HBW1 653 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 BCAP29Q9UHQ4 241 aa15.77■□□□□ 0.11
UBAP1-201ENST00000297661 ZNF487B1APH4 448 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CFLARO15519 480 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 ZBTB24O43167 697 aaPredicted RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 HUS1O60921 280 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 RNASEH2AO75792 299 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 ERCC2P18074 760 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CNTFP26441 200 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 EML3Q32P44 896 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 MGAT5BQ3V5L5 792 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 KRT80Q6KB66 452 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 FSTL4Q6MZW2 842 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 C16orf89Q6UX73 402 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 PAQR9Q6ZVX9 377 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 GPR180Q86V85 440 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 SIX6OS1Q8N1H7 587 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 KYQ8NBH2 561 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 SHCBP1Q8NEM2 672 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 EDEM1Q92611 657 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 BORCS5Q969J3 196 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 C12orf43Q96C57 262 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 RMND5BQ96G75 393 aaPredicted RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 KLHL32Q96NJ5 620 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 NEURL2Q9BR09 285 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 SRRDQ9UH36 339 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 DCDC2Q9UHG0 476 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 COL1A2P08123 1366 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 YJEFN3A6XGL0 299 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 HACD1B0YJ81 288 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 TMX2-CTNND1H3BSU7 103 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 NEMP1O14524 444 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 LTFP02788 710 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 ZNF12P17014 697 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 PTPN3P26045 913 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 TAF6P49848 677 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 AFF1P51825 1210 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 TKTL1P51854 596 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 LILRA4P59901 499 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 ABCE1P61221 599 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CTBSQ01459 385 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CEACAM7Q14002 265 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 DGKDQ16760 1214 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 PPM1LQ5SGD2 360 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 ZNF362Q5T0B9 420 aaPredicted RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 GPR141Q7Z602 305 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 SNX32Q86XE0 403 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 MAPK15Q8TD08 544 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 PDCD6IPQ8WUM4 868 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CELF6Q96J87 481 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 RHOBTB2Q9BYZ6 727 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 COG4Q9H9E3 785 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CHRAC1Q9NRG0 131 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 OLAHQ9NV23 265 aa15.76■□□□□ 0.11
UBAP1-201ENST00000297661 CNOT11Q9UKZ1 510 aaKnown RBP15.76■□□□□ 0.11
UBAP1-201ENST00000297661 K7EPI3 171 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 PSMD12O00232 456 aaPredicted RBP15.75■□□□□ 0.11
UBAP1-201ENST00000297661 MLNP12872 115 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 DARSP14868 501 aaKnown RBP15.75■□□□□ 0.11
UBAP1-201ENST00000297661 GRK2P25098 689 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 GP5P40197 560 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 ACADSBP45954 432 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 TMED10P49755 219 aaKnown RBP15.75■□□□□ 0.11
UBAP1-201ENST00000297661 TUBA4AP68366 448 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 ZNF829Q3KNS6 432 aaPredicted RBP15.75■□□□□ 0.11
UBAP1-201ENST00000297661 SLC9B1Q4ZJI4 515 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 OGFOD2Q6N063 350 aa15.75■□□□□ 0.11
UBAP1-201ENST00000297661 CARM1Q86X55 608 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms