RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ARCN1P48444 511 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 MANEALQ5VSG8 457 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 SEL1L3Q68CR1 1132 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 NEPROQ6NW34 567 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 NUP93Q8N1F7 819 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 SEPT5Q99719 369 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 STN1Q9H668 368 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 ENTPD7Q9NQZ7 604 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 NDE1Q9NXR1 346 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 GTSE1Q9NYZ3 720 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 SORCS3Q9UPU3 1222 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 PTPRDP23468 1912 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 ENO4A6NNW6 628 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 CFLARO15519 480 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC10A3P09131 477 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 PIRTP0C851 137 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 TFEBP19484 476 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 ITGAXP20702 1163 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 NUDT2P50583 147 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 MLLT6P55198 1093 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 TBL3Q12788 808 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 EIF4EBP2Q13542 120 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 LZTR1Q8N653 840 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 RNF148Q8N7C7 305 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 OR6Y1Q8NGX8 325 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 ANGPTL2Q9UKU9 493 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 PCDHB8Q9UN66 801 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 MIA3Q5JRA6 1907 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 KCNU1A8MYU2 1149 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 NT5C1B-RDH14C9J2C7 533 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZNF189O75820 626 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 CD151P48509 253 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 GATMP50440 423 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 RPL14P50914 215 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 AP2B1P63010 937 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 PTPRCAPQ14761 206 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 UGP2Q16851 508 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 LSM12Q3MHD2 195 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 CTXN3Q4LDR2 81 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 FSCBQ5H9T9 825 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 C10orf120Q5SQS8 335 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 FAM171A1Q5VUB5 890 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 TIGD7Q6NT04 549 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 SNX32Q86XE0 403 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 TMEM151AQ8N4L1 468 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 EXT2Q93063 718 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 MCMBPQ9BTE3 642 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 FAM96AQ9H5X1 160 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 KCTD3Q9Y597 815 aa15.97■□□□□ 0.15
NCKIPSD-201ENST00000294129 NLRC5Q86WI3 1866 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC4A1P02730 911 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 CPB1P15086 417 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 MGAT5BQ3V5L5 792 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 VARS2Q5ST30 1063 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZNF598Q86UK7 904 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 HEXDCQ8WVB3 486 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 TBC1D13Q9NVG8 400 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 NSMCE4AQ9NXX6 385 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 CORO1CQ9ULV4 474 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 TMEM114B3SHH9 223 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 AP3B1O00203 1094 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 ALOX15P16050 662 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 PAMP19021 973 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 TSPAN8P19075 237 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 ADRA1AP35348 466 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 ASPHQ12797 758 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 MS4A13Q5J8X5 152 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 MARC1Q5VT66 337 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 POTEHQ6S545 545 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 IZUMO2Q6UXV1 221 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 KLHDC9Q8NEP7 349 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 IGSF8Q969P0 613 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 FBXO32Q969P5 355 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 PHF21BQ96EK2 531 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 UROC1Q96N76 676 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 RPRD1AQ96P16 312 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 DRC3Q9H069 523 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 C1orf21Q9H246 121 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 POMKQ9H5K3 350 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 SUDS3Q9H7L9 328 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 RAP2CQ9Y3L5 183 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 ANKRD12Q6UB98 2062 aa15.96■□□□□ 0.15
NCKIPSD-201ENST00000294129 HDAC3O15379 428 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 CACNG3O60359 315 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 MT-CO1P00395 513 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 ATP5BP06576 529 aaKnown RBP15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 CKBP12277 381 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 ACADSP16219 412 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 MBTPS1Q14703 1052 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 SH2D4BQ5SQS7 431 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 RANBP10Q6VN20 620 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 MON1AQ86VX9 555 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 MYLK4Q86YV6 388 aaPredicted RBP15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 CFAP52Q8N1V2 620 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 TXNDC5Q8NBS9 432 aaKnown RBP15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 STYXQ8WUJ0 223 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 OLFM1Q99784 485 aa15.96■□□□□ 0.14
NCKIPSD-201ENST00000294129 MID2Q9UJV3 735 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms