RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ADRB3P13945 408 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 ITGB7P26010 798 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 IL1R2P27930 398 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 EIF4A3P38919 411 aaKnown RBP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 ABL2P42684 1182 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 CTSKP43235 329 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 GEMIN4P57678 1058 aaKnown RBP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 CLDN2P57739 230 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 SNRPD1P62314 119 aaKnown RBP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 TRIP6Q15654 476 aaKnown RBP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 SETMARQ53H47 684 aaPredicted RBP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 SLC45A4Q5BKX6 768 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 ERMARDQ5T6L9 678 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 KDM7AQ6ZMT4 941 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 ARHGAP36Q6ZRI8 547 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 RFX8Q6ZV50 586 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 TRIM69Q86WT6 500 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 NPWQ8N729 165 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 TMIEQ8NEW7 156 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 OR2AP1Q8NGE2 309 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 RHBDD1Q8TEB9 315 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 VCPIP1Q96JH7 1222 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 KLHL32Q96NJ5 620 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 CALN1Q9BXU9 219 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 PACSIN1Q9BY11 444 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 EDEM3Q9BZQ6 932 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 DEF6Q9H4E7 631 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 SP110Q9HB58 689 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 PREBQ9HCU5 417 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 KLHL11Q9NVR0 708 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 UBA2Q9UBT2 640 aaPredicted RBP9.93□□□□□ -0.82
CCDC58-201ENST00000291458 KLK13Q9UKR3 277 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 CAPN11Q9UMQ6 739 aa9.93□□□□□ -0.82
CCDC58-201ENST00000291458 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 A0A1W2PR77 199 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 J3KR12 359 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 VILLO15195 856 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 INSIG1O15503 277 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 CBFA2T2O43439 604 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 KDELR3O43731 214 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 GSRP00390 522 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 F12P00748 615 aaPredicted RBP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 PRKCGP05129 697 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 ITGAVP06756 1048 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 MYBL1P10243 752 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 ERCC2P18074 760 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 PAPOLAP51003 745 aaKnown RBP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 SEMG2Q02383 582 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 SERINC3Q13530 473 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 KRT81Q14533 505 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 STAT4Q14765 748 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 TXNRD3NBQ6F5E7 133 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 CYP4V2Q6ZWL3 525 aaPredicted RBP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 HORMAD1Q86X24 394 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 TP53INP2Q8IXH6 220 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 CHCHD4Q8N4Q1 142 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 SKA1Q96BD8 255 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 WRAP53Q9BUR4 548 aaKnown RBP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 SCNM1Q9BWG6 230 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 SLC39A8Q9C0K1 460 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 MRPL47Q9HD33 250 aaKnown RBP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 ARHGAP20Q9P2F6 1191 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 LHX3Q9UBR4 397 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 PCOLCE2Q9UKZ9 415 aa9.92□□□□□ -0.82
CCDC58-201ENST00000291458 ZFR2Q9UPR6 939 aaKnown RBP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC58-201ENST00000291458 A0A1B0GTQ1 180 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ARHGAP42A6NI28 874 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 C16orf96A6NNT2 1141 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 H3BRJ5 948 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 TLR4O00206 839 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 FLRT2O43155 660 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 LATO43561 262 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 THEGLP0DJG4 465 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ITIH2P19823 946 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 XPAP23025 273 aaPredicted RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 AMPD1P23109 780 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 AKT2P31751 481 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ARL4AP40617 200 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 AIF1P55008 147 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 NXPH1P58417 271 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 SLC20A2Q08357 652 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 SLC14A1Q13336 389 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ZNF423Q2M1K9 1284 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ZNF284Q2VY69 593 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 MYLK3Q32MK0 819 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 PARP15Q460N3 678 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ZNF542PQ5EBM4 170 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ZFYVE27Q5T4F4 411 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 CFAP58Q5T655 872 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ALKBH5Q6P6C2 394 aaKnown RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 SPATS2Q86XZ4 545 aaKnown RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 MARCH9Q86YJ5 346 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ZNF564Q8TBZ8 553 aaPredicted RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 FAM131CQ96AQ9 280 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ELF4Q99607 663 aaPredicted RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 CINPQ9BW66 212 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms