RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CYTH1Q15438 398 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 ZNF792Q3KQV3 632 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 ARL13BQ3SXY8 428 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 PCID2Q5JVF3 399 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 TRIM67Q6ZTA4 783 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 PELI3Q8N2H9 469 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 IPMKQ8NFU5 416 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 HMGCLL1Q8TB92 370 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 TKTL2Q9H0I9 626 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 TRPC7Q9HCX4 862 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 NCKIPSDQ9NZQ3 722 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 C7orf72A4D263 438 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 KCNE1P15382 129 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 HDCP19113 662 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 PCSK6P29122 969 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SLC1A2P43004 574 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 CLCN2P51788 898 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TAS2R39P59534 338 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SULT2A1Q06520 285 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TMEM259Q4ZIN3 620 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 ZNF280DQ6N043 979 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 ARHGAP36Q6ZRI8 547 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 CHERPQ8IWX8 916 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 GPC2Q8N158 579 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 DDI1Q8WTU0 396 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 LRTOMTQ8WZ04 291 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 DPF3Q92784 378 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TBL1YQ9BQ87 522 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 COQ10BQ9H8M1 238 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 CRTAC1Q9NQ79 661 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SUCOQ9UBS9 1254 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SLC2A6Q9UGQ3 507 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 KCNH4Q9UQ05 1017 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TANC1Q9C0D5 1861 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 RBM47A0AV96 593 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 DFFAO00273 331 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 PYGLP06737 847 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SMPD1P17405 629 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 ARNTP27540 789 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 NR1H2P55055 460 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 RPS27LQ71UM5 84 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 PIWIL4Q7Z3Z4 852 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 CNTN4Q8IWV2 1026 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SNX31Q8N9S9 440 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 SMOQ99835 787 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 FICDQ9BVA6 458 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 WDCPQ9H6R7 721 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 CYP4F12Q9HCS2 524 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 UTP6Q9NYH9 597 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 CNOT11Q9UKZ1 510 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 RNF11Q9Y3C5 154 aa13.38□□□□□ -0.27
SLC28A1-201ENST00000286749 ARHGAP10A1A4S6 786 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 H3BSA7 217 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 AP3B1O00203 1094 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 C8BP07358 591 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 NELFEP18615 380 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 GJA9P57773 515 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 CREB5Q02930 508 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 REP15Q6BDI9 236 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 SPPL2BQ8TCT7 592 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 DCPSQ96C86 337 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 ZNF419Q96HQ0 510 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 MRPL57Q9BQC6 102 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 TNFRSF12AQ9NP84 129 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 CACNA2D2Q9NY47 1150 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 FBP2O00757 339 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 SNAI1O95863 264 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 DNAJB1P25685 340 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 SLC5A2P31639 672 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 FASTKQ14296 549 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 AGKQ53H12 422 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 XKR4Q5GH76 650 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 FAM219BQ5XKK7 198 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 ZNF470Q6ECI4 717 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 RWDD4Q6NW29 188 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 FAM35AQ86V20 835 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 SHCBP1Q8NEM2 672 aa13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 PPHLN1Q8NEY8 458 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-201ENST00000286749 ZMIZ2Q8NF64 920 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms