RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CD68P34810 354 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 MAGEA12P43365 314 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 NUP107P57740 925 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 GNA12Q03113 381 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 TRAF2Q12933 501 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 AARS2Q5JTZ9 985 aaKnown RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 GRAMD4Q6IC98 578 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 PIGZQ86VD9 579 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 NPWQ8N729 165 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 SPAG4Q9NPE6 437 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 PDGFCQ9NRA1 345 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 COQ9O75208 318 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 KCNH1O95259 989 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 AP2A1O95782 977 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 OCM2P0CE71 109 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 OCMP0CE72 109 aaPredicted RBP13.04□□□□□ -0.32
COL8A1-202ENST00000273342 NCAM1P13591 858 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 UGT1A1P22309 533 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 UGT1A4P22310 534 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 CES1P23141 567 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 ICAM3P32942 547 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 UGT1A3P35503 534 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 UGT1A5P35504 534 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 PTPN9P43378 593 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 NAB1Q13506 487 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 LAMC2Q13753 1193 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 GEN1Q17RS7 908 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 KIF19Q2TAC6 998 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 NHSL2Q5HYW2 709 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 Q6ZNX1 250 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 GADL1Q6ZQY3 521 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SLC7A14Q8TBB6 771 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SPPL2BQ8TCT7 592 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 HEXDCQ8WVB3 486 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 PIGVQ9NUD9 493 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SCN1AP35498 2009 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 K7EPI3 171 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 BEST1O76090 585 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 CLCN2P51788 898 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 CDH13P55290 713 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SEPT6Q14141 434 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 FBXO48Q5FWF7 155 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 C6orf10Q5SRN2 563 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 ESRP1Q6NXG1 681 aaKnown RBP13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SLC26A9Q7LBE3 791 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 IPMKQ8NFU5 416 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 STYXQ8WUJ0 223 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 PBXIP1Q96AQ6 731 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 TBC1D23Q9NUY8 699 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 TRNAU1APQ9NX07 287 aaKnown RBP13.04□□□□□ -0.32
COL8A1-202ENST00000273342 VPS28Q9UK41 221 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 SLC8A2Q9UPR5 921 aa13.04□□□□□ -0.32
COL8A1-202ENST00000273342 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 FAM95CA0A1B0GW59 222 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 HACD1B0YJ81 288 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 NR5A2O00482 541 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
COL8A1-202ENST00000273342 INSRRP14616 1297 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 AKAP5P24588 427 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 CASP2P42575 452 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 C21orf59P57076 290 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TAS2R39P59534 338 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 STX5Q13190 355 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 CBLBQ13191 982 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 SLC12A1Q13621 1099 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 LRP8Q14114 963 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 DPYSQ14117 519 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TGFBIQ15582 683 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 ZIK1Q3SY52 487 aaPredicted RBP13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TMEM126BQ8IUX1 230 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 LZTR1Q8N653 840 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 MAML3Q96JK9 1138 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 EFHD1Q9BUP0 239 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 SETD4Q9NVD3 440 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 CROTQ9UKG9 612 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 OAZ3Q9UMX2 235 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 H3BMQ9 156 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 CCL22O00626 93 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 NCK1P16333 377 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 OXTRP30559 389 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 GRM5P41594 1212 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 VPS26BQ4G0F5 336 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 NOMO2Q5JPE7 1267 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 ARHGAP17Q68EM7 881 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 LYSMD3Q7Z3D4 306 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms